RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TRDMT1O14717 391 aaKnown RBP18.45■□□□□ 0.54
SEC13-218ENST00000490283 DRD1P21728 446 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 GJA4P35212 333 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 SLC8A3P57103 927 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CCINQ13939 588 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 MORC3Q14149 939 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 EML3Q32P44 896 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CBWD6Q4V339 395 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 TMEM196Q5HYL7 178 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CBWD3Q5JTY5 395 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CBWD5Q5RIA9 395 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 ZMIZ2Q8NF64 920 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 RNF38Q9H0F5 515 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 PNPLA8Q9NP80 782 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 IL37Q9NZH6 218 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 GMIPQ9P107 970 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CFAP97Q9P2B7 532 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 CTNND2Q9UQB3 1225 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 DENND4CQ5VZ89 1909 aa18.45■□□□□ 0.54
SEC13-218ENST00000490283 ZFHX2Q9C0A1 2572 aaPredicted RBP18.44■□□□□ 0.54
SEC13-218ENST00000490283 FAM92AA1XBS5 289 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 OTOL1A6NHN0 477 aaPredicted RBP18.44■□□□□ 0.54
SEC13-218ENST00000490283 ATG13O75143 517 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 BEST1O76090 585 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 CD44P16070 742 aaKnown RBP18.44■□□□□ 0.54
SEC13-218ENST00000490283 PAK1Q13153 545 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 FBXO43Q4G163 708 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 SNX30Q5VWJ9 437 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 FOXR2Q6PJQ5 311 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 Q6ZS52 159 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 CLEC20AQ6ZU45 233 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 CCDC26Q8TAB7 109 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 WHAMMQ8TF30 809 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 CD101Q93033 1021 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 SLC35C1Q96A29 364 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 TMEM176AQ96HP8 235 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 TBC1D14Q9P2M4 693 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 COQ4Q9Y3A0 265 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 SH3BP1Q9Y3L3 701 aa18.44■□□□□ 0.54
SEC13-218ENST00000490283 ZNF638Q14966 1978 aaKnown RBP18.44■□□□□ 0.54
SEC13-218ENST00000490283 COCHO43405 550 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
SEC13-218ENST00000490283 GNA14O95837 355 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
SEC13-218ENST00000490283 TBXAS1P24557 533 aaPredicted RBP18.43■□□□□ 0.54
SEC13-218ENST00000490283 SATB1Q01826 763 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 GOLGA8FQ08AF8 430 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 GOLGA8DPQ0D2H9 430 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 CUL2Q13617 745 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 TTI2Q6NXR4 508 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 ZBTB44Q8NCP5 570 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 SECISBP2LQ93073 1101 aaKnown RBP18.43■□□□□ 0.54
SEC13-218ENST00000490283 DUSP16Q9BY84 665 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 LINC00597Q9H2U6 94 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 SCML2Q9UQR0 700 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 PATJQ8NI35 1801 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 CACNA1IQ9P0X4 2223 aa18.43■□□□□ 0.54
SEC13-218ENST00000490283 KIF26AQ9ULI4 1882 aaPredicted RBP18.42■□□□□ 0.54
SEC13-218ENST00000490283 E2F8A0AVK6 867 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 PPP1R3GB7ZBB8 358 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 TLR5O60602 858 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 PAPSS2O95340 614 aaPredicted RBP18.42■□□□□ 0.54
SEC13-218ENST00000490283 FMO5P49326 533 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 GALK1P51570 392 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 GAS6Q14393 721 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 PPP1R26Q5T8A7 1209 aaPredicted RBP18.42■□□□□ 0.54
SEC13-218ENST00000490283 FSTL4Q6MZW2 842 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 TADA2BQ86TJ2 420 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 NELL1Q92832 810 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 TATDN2Q93075 761 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 ARID3AQ99856 593 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 CCSER2Q9H7U1 834 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 RAB23Q9ULC3 237 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 GREB1Q4ZG55 1949 aa18.42■□□□□ 0.54
SEC13-218ENST00000490283 ADH1CP00326 375 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 ZDHHC11BP0C7U3 371 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 ZXDBP98169 803 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 LRMPQ12912 555 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 SLC4A11Q8NBS3 891 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 RUBCNQ92622 972 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 OTUB2Q96DC9 234 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 CHFRQ96EP1 664 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 NT5C1BQ96P26 610 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 DUSP9Q99956 384 aaKnown RBP18.41■□□□□ 0.54
SEC13-218ENST00000490283 KIAA1468Q9P260 1216 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 SLC8A2Q9UPR5 921 aa18.41■□□□□ 0.54
SEC13-218ENST00000490283 PMM2O15305 246 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 P4HA2O15460 535 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 CYP26A1O43174 497 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 LILRB5O75023 590 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 RNF40O75150 1001 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 EGFP01133 1207 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 CCDC192P0DO97 292 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 BMP6P22004 513 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 ATP5C1P36542 298 aaKnown RBP18.4■□□□□ 0.54
SEC13-218ENST00000490283 PSEN1P49768 467 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 RAD23BP54727 409 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 STX17P56962 302 aa18.4■□□□□ 0.54
SEC13-218ENST00000490283 CAMK4Q16566 473 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms