RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 DDX42Q86XP3 938 aaKnown RBP eCLIP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 FRMD1Q8N878 549 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 PIGKQ92643 395 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ZFRQ96KR1 1074 aaKnown RBP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 KCNK16Q96T55 309 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ARHGEF4Q9NR80 690 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 CIZ1Q9ULV3 898 aaPredicted RBP16.87■□□□□ 0.29
PLOD3-216ENST00000489927 WDFY3Q8IZQ1 3526 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 ABCA7Q8IZY2 2146 aa16.87■□□□□ 0.29
PLOD3-216ENST00000489927 COCHO43405 550 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 ADAM23O75077 832 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 PPP6R2O75170 966 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 CASP1P29466 404 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 P2RY2P41231 377 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 GRIA2P42262 883 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 SNRPFP62306 86 aaKnown RBP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 EHHADHQ08426 723 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 HSF5Q4G112 596 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 LY6G5CQ5SRR4 150 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 PHTF2Q8N3S3 785 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 IQUBQ8NA54 791 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 WHAMMQ8TF30 809 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 FBXO32Q969P5 355 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 CHORDC1Q9UHD1 332 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-216ENST00000489927 UBE4BO95155 1302 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 NUP205Q92621 2012 aa16.86■□□□□ 0.29
PLOD3-216ENST00000489927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 E2F8A0AVK6 867 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-216ENST00000489927 MAP3K13O43283 966 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 RTN3O95197 1032 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-216ENST00000489927 PROS1P07225 676 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 ATICP31939 592 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 PTGER3P43115 390 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 TNFRSF4P43489 277 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 CASP4P49662 377 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 CDH8P55286 799 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 FOXC1Q12948 553 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 EOGTQ5NDL2 527 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 UNC13DQ70J99 1090 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 ARMCX6Q7L4S7 300 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 TMEFF1Q8IYR6 380 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 NAT16Q8N8M0 369 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 HMGB4Q8WW32 186 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 OVCA2Q8WZ82 227 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-216ENST00000489927 SPACA7Q96KW9 195 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 SMYD3Q9H7B4 428 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 CCSER2Q9H7U1 834 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 MBD1Q9UIS9 605 aaPredicted RBP16.85■□□□□ 0.29
PLOD3-216ENST00000489927 WASF3Q9UPY6 502 aa16.85■□□□□ 0.29
PLOD3-216ENST00000489927 THADAQ6YHU6 1953 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 TCRBV21S2A2A0A5A6 115 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 C1QTNF9BB2RNN3 333 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 PHACTR2O75167 634 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 C1QTNF9P0C862 333 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 CEACAM1P13688 526 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 CSRP1P21291 193 aaKnown RBP16.84■□□□□ 0.29
PLOD3-216ENST00000489927 GAD2Q05329 585 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 MAP7D1Q3KQU3 841 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 UAP1L1Q3KQV9 507 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 SNX30Q5VWJ9 437 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 PAQR9Q6ZVX9 377 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 FAM35AQ86V20 835 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 ETFBKMTQ8IXQ9 262 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 PLEKHO2Q8TD55 490 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 ELMO3Q96BJ8 720 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 MED10Q9BTT4 135 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 BLZF1Q9H2G9 400 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 VRTNQ9H8Y1 702 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 SLC39A2Q9NP94 309 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 TMEM74BQ9NUR3 256 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 EVLQ9UI08 416 aaPredicted RBP16.84■□□□□ 0.29
PLOD3-216ENST00000489927 SH3BP1Q9Y3L3 701 aa16.84■□□□□ 0.29
PLOD3-216ENST00000489927 TBC1D3BA6NDS4 549 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 ATP8B3O60423 1300 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 EXOC3O60645 756 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 CUTAO60888 179 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 CLSTN1O94985 981 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 SPINK2P20155 84 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 SLC5A3P53794 718 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 BIRC3Q13489 604 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 ZNF699Q32M78 642 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 UNQ6494/PRO21346Q6UXR6 183 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 SYT12Q8IV01 421 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms