RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 CPT1BQ92523 772 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 HSPH1Q92598 858 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 PWWP2AQ96N64 755 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SMC6Q96SB8 1091 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 PPP1R16BQ96T49 567 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 TRIM6Q9C030 488 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 CAPN7Q9Y6W3 813 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 PDCD11Q14690 1871 aaKnown RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 DOCK3Q8IZD9 2030 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SNX3O60493 162 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 DARSP14868 501 aaKnown RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 RPL22P35268 128 aaKnown RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 PTPN9P43378 593 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ACADSBP45954 432 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 IFNAR2P48551 515 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 CAP1Q01518 475 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ORC1Q13415 861 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 KIZQ2M2Z5 673 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 EFHC2Q5JST6 749 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 OLFML1Q6UWY5 402 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SLC35F5Q8WV83 523 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SOCS4Q8WXH5 440 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 RTP4Q96DX8 246 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 RNF157Q96PX1 679 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ZNF670Q9BS34 389 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 OSBPL7Q9BZF2 842 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 CTNNAL1Q9UBT7 734 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 ZMYND8Q9ULU4 1186 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 USP15Q9Y4E8 981 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-208ENST00000489611 SNX9Q9Y5X1 595 aa15.62■□□□□ 0.09
COL9A1-208ENST00000489611 CHADO15335 359 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 PFKMP08237 780 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 ETS1P14921 441 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 ZFXP17010 805 aaPredicted RBP15.61■□□□□ 0.09
COL9A1-208ENST00000489611 CYP3A5P20815 502 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
COL9A1-208ENST00000489611 DPYSL3Q14195 570 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 KRT81Q14533 505 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 CRYBG2Q8N1P7 616 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 ALKBH8Q96BT7 664 aaKnown RBP15.61■□□□□ 0.09
COL9A1-208ENST00000489611 APBA2Q99767 749 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 SETD4Q9NVD3 440 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 PAK5Q9P286 719 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 TBK1Q9UHD2 729 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 GABRQQ9UN88 632 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 Q9Y3F1 56 aa15.61■□□□□ 0.09
COL9A1-208ENST00000489611 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.61■□□□□ 0.09
COL9A1-208ENST00000489611 OAS1P00973 400 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 SMIM10L2AP0DMW4 78 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 SMIM10L2BP0DMW5 78 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 RPL34P49207 117 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 BCAT1P54687 386 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 FCGRTP55899 365 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 TMED2Q15363 201 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 CCDC14Q49A88 953 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 PPP1R26Q5T8A7 1209 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 DARS2Q6PI48 645 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 DPH6Q7L8W6 267 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 PRUNE1Q86TP1 453 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 CYP4X1Q8N118 509 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 NME8Q8N427 588 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 LENG1Q96BZ8 264 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ELAC2Q9BQ52 826 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ACSS3Q9H6R3 686 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 SNTG2Q9NY99 539 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 TRIP11Q15643 1979 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 TCP11X1B4DZS4 312 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ZNF189O75820 626 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 CD48P09326 243 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ZNF865P0CJ78 1059 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 KCNE1P15382 129 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 KRT15P19012 456 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 GBP2P32456 591 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 CPT1AP50416 773 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 BST2Q10589 180 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 SPARCL1Q14515 664 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 FBXO47Q5MNV8 452 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 C9orf57Q5W0N0 161 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 NUGGCQ68CJ6 796 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 CYP4V2Q6ZWL3 525 aaPredicted RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 SLC26A9Q7LBE3 791 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 TRPM8Q7Z2W7 1104 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ANKRD42Q8N9B4 389 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ANKRD52Q8NB46 1076 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 TGS1Q96RS0 853 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 KATNAL1Q9BW62 490 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 XPO7Q9UIA9 1087 aaKnown RBP15.6■□□□□ 0.09
COL9A1-208ENST00000489611 ARL2BPQ9Y2Y0 163 aa15.6■□□□□ 0.09
COL9A1-208ENST00000489611 BCLAF3A2AJT9 711 aaKnown RBP15.59■□□□□ 0.09
COL9A1-208ENST00000489611 APOL1O14791 398 aa15.59■□□□□ 0.09
COL9A1-208ENST00000489611 TRPA1O75762 1119 aa15.59■□□□□ 0.09
COL9A1-208ENST00000489611 DNAJC8O75937 253 aaPredicted RBP15.59■□□□□ 0.09
COL9A1-208ENST00000489611 GNAT1P11488 350 aa15.59■□□□□ 0.09
COL9A1-208ENST00000489611 CYP2C9P11712 490 aa15.59■□□□□ 0.09
COL9A1-208ENST00000489611 GCAP28676 217 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms