RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 DPEP3Q9H4B8 488 aa18.07■□□□□ 0.48
TOP3B-217ENST00000489581 ATXN2Q99700 1313 aaKnown RBP18.06■□□□□ 0.48
TOP3B-217ENST00000489581 A0A0A0MRY4 1105 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 TNFRSF10BO14763 440 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 ADAM23O75077 832 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 ADH1CP00326 375 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 DLATP10515 647 aaKnown RBP18.06■□□□□ 0.48
TOP3B-217ENST00000489581 GRIA2P42262 883 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 MAP7D1Q3KQU3 841 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 LY6G5CQ5SRR4 150 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 KIAA1211LQ6NV74 962 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 SYT12Q8IV01 421 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 NAT16Q8N8M0 369 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 ZNF518BQ9C0D4 1074 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 BAHCC1Q9P281 2608 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 AKAP13Q12802 2813 aa18.06■□□□□ 0.48
TOP3B-217ENST00000489581 ZZEF1O43149 2961 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TCRBV21S2A2A0A5A6 115 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TACC1O75410 805 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 ENGP17813 658 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TNNI1P19237 187 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 YWHAQP27348 245 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 HOXD13P35453 343 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TNFRSF4P43489 277 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 STXBP4Q6ZWJ1 553 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 DDX42Q86XP3 938 aaKnown RBP eCLIP18.05■□□□□ 0.48
TOP3B-217ENST00000489581 DEFB119Q8N690 84 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 GATA6Q92908 595 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 FBXO32Q969P5 355 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 B3GNT5Q9BYG0 378 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 ELOVL4Q9GZR5 314 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 FSCN3Q9NQT6 498 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TBC1D14Q9P2M4 693 aa18.05■□□□□ 0.48
TOP3B-217ENST00000489581 CHORDC1Q9UHD1 332 aaPredicted RBP18.05■□□□□ 0.48
TOP3B-217ENST00000489581 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 A8MXQ7 604 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.04■□□□□ 0.48
TOP3B-217ENST00000489581 COCHO43405 550 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 HYAL3O43820 417 aaPredicted RBP18.04■□□□□ 0.48
TOP3B-217ENST00000489581 CFIP05156 583 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 PDCP20941 246 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 ITPKAP23677 461 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 TNNC1P63316 161 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 BYSLQ13895 437 aaKnown RBP18.04■□□□□ 0.48
TOP3B-217ENST00000489581 SNRNP35Q16560 246 aaKnown RBP18.04■□□□□ 0.48
TOP3B-217ENST00000489581 LYSMD4Q5XG99 296 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 NUP93Q8N1F7 819 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 PHTF2Q8N3S3 785 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 CCDC127Q96BQ5 260 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 SLC32A1Q9H598 525 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 KIAA1586Q9HCI6 787 aa18.04■□□□□ 0.48
TOP3B-217ENST00000489581 E2F8A0AVK6 867 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 CLIC2O15247 247 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 FAM163BP0C2L3 166 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 GAD2Q05329 585 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 BTBD8Q5XKL5 378 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 SLC23A3Q6PIS1 610 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 B3GALNT2Q8NCR0 500 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 ZFRQ96KR1 1074 aaKnown RBP18.03■□□□□ 0.48
TOP3B-217ENST00000489581 USP28Q96RU2 1077 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 KCNK16Q96T55 309 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
TOP3B-217ENST00000489581 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
TOP3B-217ENST00000489581 PILRBQ9UKJ0 227 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 SH3BP1Q9Y3L3 701 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 PKD1L2Q7Z442 2459 aa18.03■□□□□ 0.48
TOP3B-217ENST00000489581 SPAARA0A1B0GVQ0 90 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 TMEM8BA6NDV4 472 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 RTN3O95197 1032 aaPredicted RBP18.02■□□□□ 0.48
TOP3B-217ENST00000489581 WASP42768 502 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 CYP2J2P51589 502 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 MYL6P60660 151 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 CYP24A1Q07973 514 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 CUL4AQ13619 759 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 PSMD6Q15008 389 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 SPDYCQ5MJ68 293 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 HECTD3Q5T447 861 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 ETFBKMTQ8IXQ9 262 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 ZNF513Q8N8E2 541 aaPredicted RBP18.02■□□□□ 0.48
TOP3B-217ENST00000489581 SCAMP5Q8TAC9 235 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 OTUB2Q96DC9 234 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 GTPBP2Q9BX10 602 aaKnown RBP18.02■□□□□ 0.48
TOP3B-217ENST00000489581 AGPAT3Q9NRZ7 376 aa18.02■□□□□ 0.48
TOP3B-217ENST00000489581 SPEGQ15772 3267 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 SRRM3A6NNA2 597 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TRIM24O15164 1050 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 EIF3DO15371 548 aaKnown RBP eCLIP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TGFB1I1O43294 461 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TULP3O75386 442 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 GABRG2P18507 467 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 SYT1P21579 422 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 DPP6P42658 865 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 ATXN3P54252 364 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 CDH8P55286 799 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 SIM1P81133 766 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 RPL6Q02878 288 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms