RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RNF38Q9H0F5 515 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 EBF3Q9H4W6 596 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 LTB4R2Q9NPC1 389 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 UBE2TQ9NPD8 197 aaPredicted RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 DUS2Q9NX74 493 aaKnown RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 SMPD4Q9NXE4 827 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 ARHGAP26Q9UNA1 814 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 MTF2Q9Y483 593 aaPredicted RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 LEFTY2O00292 366 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 ARNTLO00327 626 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 OAS1P00973 400 aaKnown RBP14.12□□□□□ -0.15
CCL28-202ENST00000489442 PAEPP09466 180 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 KRT5P13647 590 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 MFAP3P55082 362 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 MLLT6P55198 1093 aaPredicted RBP14.12□□□□□ -0.15
CCL28-202ENST00000489442 AMPD2Q01433 879 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 RUNX3Q13761 415 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 MAN2A1Q16706 1144 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 TRIM68Q6AZZ1 485 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 RBM43Q6ZSC3 357 aaKnown RBP14.12□□□□□ -0.15
CCL28-202ENST00000489442 GPRIN1Q7Z2K8 1008 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 RALGPS2Q86X27 583 aaPredicted RBP14.12□□□□□ -0.15
CCL28-202ENST00000489442 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCL28-202ENST00000489442 CCDC105Q8IYK2 499 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 PRSS33Q8NF86 280 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 FAM122AQ96E09 287 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 MSANTD3Q96H12 275 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 FAM81BQ96LP2 452 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 FAM83CQ9BQN1 747 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 TUBGCP2Q9BSJ2 902 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 OSBPL6Q9BZF3 934 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 IRF2BPLQ9H1B7 796 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 ANO10Q9NW15 660 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 SCML2Q9UQR0 700 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 CPQQ9Y646 472 aa14.12□□□□□ -0.15
CCL28-202ENST00000489442 COL4A3Q01955 1670 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 ATG2BQ96BY7 2078 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 FAM92AA1XBS5 289 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 KCNJ18B7U540 433 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 HHLA1C9JL84 531 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 SPECC1L-ADORA2AF8WAN1 911 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 COCHO43405 550 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 TARSP26639 723 aaKnown RBP14.11□□□□□ -0.15
CCL28-202ENST00000489442 SOX9P48436 509 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 KIF11P52732 1056 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 BCAT1P54687 386 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 SLC7A9P82251 487 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
CCL28-202ENST00000489442 NR1H3Q13133 447 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 KCNJ12Q14500 433 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 ZNF77Q15935 545 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 STX1AQ16623 288 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 SNX30Q5VWJ9 437 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 ENOSF1Q7L5Y1 443 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 CPA6Q8N4T0 437 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 UBR7Q8N806 425 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 RBBP8NLQ8NC74 664 aaPredicted RBP14.11□□□□□ -0.15
CCL28-202ENST00000489442 OSCP1Q8WVF1 389 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 UBXN6Q9BZV1 441 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 NDST4Q9H3R1 872 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 CCSER2Q9H7U1 834 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
CCL28-202ENST00000489442 NFE2L3Q9Y4A8 694 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 WNT6Q9Y6F9 365 aa14.11□□□□□ -0.15
CCL28-202ENST00000489442 COL4A2P08572 1712 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 MYOFQ9NZM1 2061 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 GTPBP10A4D1E9 387 aaKnown RBP14.1□□□□□ -0.15
CCL28-202ENST00000489442 H0Y858 1186 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 SLC9A3R1O14745 358 aaPredicted RBP14.1□□□□□ -0.15
CCL28-202ENST00000489442 CYP26A1O43174 497 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TLR5O60602 858 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 OLFM2O95897 454 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TPM2P07951 284 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TCF3P15923 654 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 SLC9A1P19634 815 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 CTHP32929 405 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 ATP5C1P36542 298 aaKnown RBP14.1□□□□□ -0.15
CCL28-202ENST00000489442 USP8P40818 1118 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 MAGEA9P43362 315 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TUBP50607 506 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 PDE4CQ08493 712 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 USP4Q13107 963 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 STILQ15468 1287 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 VWA3BQ502W6 1294 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TADA2BQ86TJ2 420 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 RIN3Q8TB24 985 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 UBA3Q8TBC4 463 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 ENOX1Q8TC92 643 aaKnown RBP14.1□□□□□ -0.15
CCL28-202ENST00000489442 EXOC4Q96A65 974 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 SPATA6Q9NWH7 488 aaPredicted RBP14.1□□□□□ -0.15
CCL28-202ENST00000489442 CFAP97Q9P2B7 532 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms