RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ARHGAP17Q68EM7 881 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 TXNDC11Q6PKC3 985 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 TRIM59Q8IWR1 403 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 SPEM1Q8N4L4 309 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 SLC4A11Q8NBS3 891 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 TATDN2Q93075 761 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 NKD2Q969F2 451 aaPredicted RBP20.09■□□□□ 0.81
MRPL55-230ENST00000489430 HEXIM2Q96MH2 286 aaKnown RBP20.09■□□□□ 0.81
MRPL55-230ENST00000489430 ECT2Q9H8V3 914 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 TLR8Q9NR97 1041 aaKnown RBP20.09■□□□□ 0.81
MRPL55-230ENST00000489430 KIAA1257Q9ULG3 409 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 SCML2Q9UQR0 700 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 DENND4CQ5VZ89 1909 aa20.09■□□□□ 0.81
MRPL55-230ENST00000489430 MYO15AQ9UKN7 3530 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 COL4A3Q01955 1670 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 HHLA1C9JL84 531 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 NFATC1O95644 943 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 CCDC192P0DO97 292 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 SLC8A3P57103 927 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 GRSF1Q12849 480 aaKnown RBP eCLIP20.08■□□□□ 0.81
MRPL55-230ENST00000489430 IFRD2Q12894 506 aaPredicted RBP20.08■□□□□ 0.81
MRPL55-230ENST00000489430 CAMK4Q16566 473 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 EML3Q32P44 896 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 TMEM196Q5HYL7 178 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 PPP1R26Q5T8A7 1209 aaPredicted RBP20.08■□□□□ 0.81
MRPL55-230ENST00000489430 TRIM68Q6AZZ1 485 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 ZNF276Q8N554 614 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 NELL1Q92832 810 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 ARID3AQ99856 593 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 CHORDC1Q9UHD1 332 aaPredicted RBP20.08■□□□□ 0.81
MRPL55-230ENST00000489430 PCDHGA2Q9Y5H1 932 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 CPQQ9Y646 472 aa20.08■□□□□ 0.81
MRPL55-230ENST00000489430 GREB1Q4ZG55 1949 aa20.08■□□□□ 0.8
MRPL55-230ENST00000489430 OBSL1O75147 1896 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 E2F8A0AVK6 867 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 OTOL1A6NHN0 477 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-230ENST00000489430 GFRA3O60609 400 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 PAPSS2O95340 614 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-230ENST00000489430 ARSAP15289 507 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 PSEN1P49768 467 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 KIF11P52732 1056 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 NRLP54845 237 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 ZXDBP98169 803 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 ZNF394Q53GI3 561 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 KLHDC10Q6PID8 442 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 ANKRD52Q8NB46 1076 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 TTC8Q8TAM2 541 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 OTUB2Q96DC9 234 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 SRRTQ9BXP5 876 aaKnown RBP20.07■□□□□ 0.8
MRPL55-230ENST00000489430 CLSTN2Q9H4D0 955 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 CYLDQ9NQC7 956 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 TBC1D14Q9P2M4 693 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 TICRRQ7Z2Z1 1910 aa20.07■□□□□ 0.8
MRPL55-230ENST00000489430 KIF26AQ9ULI4 1882 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-230ENST00000489430 COCHO43405 550 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 MBL2P11226 248 aaPredicted RBP20.06■□□□□ 0.8
MRPL55-230ENST00000489430 DRD1P21728 446 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 GJA4P35212 333 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 PON2Q15165 354 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 FBXO43Q4G163 708 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 SMYD5Q6GMV2 418 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 CCDC186Q7Z3E2 898 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 CCDC26Q8TAB7 109 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 ZSCAN32Q9NX65 697 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 GMIPQ9P107 970 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.06■□□□□ 0.8
MRPL55-230ENST00000489430 WNT6Q9Y6F9 365 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 USP3Q9Y6I4 520 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 MIA3Q5JRA6 1907 aa20.06■□□□□ 0.8
MRPL55-230ENST00000489430 PRR23AA6NEV1 266 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 TLR5O60602 858 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 ACO1P21399 889 aaKnown RBP20.05■□□□□ 0.8
MRPL55-230ENST00000489430 CXCL12P48061 93 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 STX17P56962 302 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 GCNT1Q02742 428 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 CSTF1Q05048 431 aaKnown RBP20.05■□□□□ 0.8
MRPL55-230ENST00000489430 KCNH2Q12809 1159 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 TADA2BQ86TJ2 420 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 ADGRG2Q8IZP9 1017 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 UBR7Q8N806 425 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 ZBTB44Q8NCP5 570 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 LMO3Q8TAP4 145 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 JAKMIP2Q96AA8 810 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 CHFRQ96EP1 664 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 CDK5RAP1Q96SZ6 601 aaKnown RBP20.05■□□□□ 0.8
MRPL55-230ENST00000489430 P2RY13Q9BPV8 354 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 DMDP11532 3685 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 USP34Q70CQ2 3546 aa20.05■□□□□ 0.8
MRPL55-230ENST00000489430 AFPP02771 609 aaKnown RBP20.04■□□□□ 0.8
MRPL55-230ENST00000489430 PAEPP09466 180 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 PRKCSHP14314 528 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-230ENST00000489430 HOXA6P31267 233 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 GAS6Q14393 721 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 SGO2Q562F6 1265 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 ZFRQ96KR1 1074 aaKnown RBP20.04■□□□□ 0.8
MRPL55-230ENST00000489430 NACA2Q9H009 215 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 SMPD4Q9NXE4 827 aa20.04■□□□□ 0.8
MRPL55-230ENST00000489430 CLIC5Q9NZA1 410 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms