RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SEPT10Q9P0V9 454 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 TRIP11Q15643 1979 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 PLXNA2O75051 1894 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 A0A1B0GVM2 712 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 TTLL8A6PVC2 850 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 TCP11X1B4DZS4 312 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 SOAT2O75908 522 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 NPTXRO95502 500 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 GP1BAP07359 652 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 SRGAP2CP0DJJ0 459 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ARF4P18085 180 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 CSTF2P33240 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 C21orf59P57076 290 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 BNIP3Q12983 259 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 RESTQ13127 1097 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ALX1Q15699 326 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 CENPPQ6IPU0 288 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 MON1AQ86VX9 555 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 IQCA1Q86XH1 822 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 TBC1D10CQ8IV04 446 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 TTC9BQ8N6N2 239 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ANKK1Q8NFD2 765 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 WDR36Q8NI36 951 aaKnown RBP8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ACOX2Q99424 681 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 SH2D3AQ9BRG2 576 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ORAI3Q9BRQ5 295 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 NUP58Q9BVL2 599 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 ACE2Q9BYF1 805 aaPredicted RBP8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 KRTAP17-1Q9BYP8 105 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 PSTPIP2Q9H939 334 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 RAD54BQ9Y620 910 aa8.15□□□□□ -1.1
EXOSC3-206ENST00000489414 TMEM150BA6NC51 233 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 TBX3O15119 743 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 GRID2O43424 1007 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 SIGLEC6O43699 453 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 F11P03951 625 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 OR4Q2P0C623 313 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 ARRB1P49407 418 aaPredicted RBP8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 ADCY7P51828 1080 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 NLRP12P59046 1061 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 AMHR2Q16671 573 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 SLC27A1Q6PCB7 646 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 NIPA1Q7RTP0 329 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 LRRN4CLQ8ND94 238 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 TTC16Q8NEE8 873 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 UROC1Q96N76 676 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 C6orf106Q9H6K1 298 aaPredicted RBP8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 TP53TG5Q9Y2B4 290 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 MAP4K5Q9Y4K4 846 aa8.14□□□□□ -1.11
EXOSC3-206ENST00000489414 TBC1D3BA6NDS4 549 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 TRIM38O00635 465 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 PRICKLE3O43900 615 aaPredicted RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 CDC45O75419 566 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 STBD1O95210 358 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 TCF3P15923 654 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 ATF6P18850 670 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 FECHP22830 423 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 CD27P26842 260 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 LEPRP48357 1165 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 DAB2P98082 770 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 NCBP1Q09161 790 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 ZNF211Q13398 564 aaPredicted RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 DHCR24Q15392 516 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 CDR2LQ86X02 465 aaPredicted RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 CHPFQ8IZ52 775 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 ATAD1Q8NBU5 361 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 PRPF31Q8WWY3 499 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 HDAC11Q96DB2 347 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 PPP1R10Q96QC0 940 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 MKRN2Q9H000 416 aaKnown RBP8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 GOLGA2P5Q9HBQ8 144 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 SEL1LQ9UBV2 794 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 SAMM50Q9Y512 469 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 SCN8AQ9UQD0 1980 aa8.13□□□□□ -1.11
EXOSC3-206ENST00000489414 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 MTMR11A4FU01 709 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 PPP1R3GB7ZBB8 358 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 FGAP02671 866 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 CKMT1AP12532 417 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 NR1D1P20393 614 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 CAPN3P20807 821 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 RXRGP48443 463 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 HAND2P61296 217 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 RACK1P63244 317 aaKnown RBP8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 LAMTOR4Q0VGL1 99 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 FUT2Q10981 343 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 GPR17Q13304 367 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 SDE2Q6IQ49 451 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 ADGRG2Q8IZP9 1017 aa8.12□□□□□ -1.11
EXOSC3-206ENST00000489414 ZNF276Q8N554 614 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms