RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 FBXO4Q9UKT5 387 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 PRKCSHP14314 528 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-213ENST00000489215 FZD5Q13467 585 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 PPP2R5DQ14738 602 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 TPD52L1Q16890 204 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-213ENST00000489215 CT47A1Q5JQC4 288 aaPredicted RBP25.36■■□□□ 1.65
PTPN18-213ENST00000489215 SYNPOQ8N3V7 929 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 EBF3Q9H4W6 596 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 LMAN1LQ9HAT1 526 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 LMBRD1Q9NUN5 540 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 SCML2Q9UQR0 700 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 WDFY4Q6ZS81 3184 aa25.36■■□□□ 1.65
PTPN18-213ENST00000489215 ZDHHC11BP0C7U3 371 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 NBL1P41271 181 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 PSEN1P49768 467 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 TNK2Q07912 1038 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 ZC3H14Q6PJT7 736 aaKnown RBP25.35■■□□□ 1.65
PTPN18-213ENST00000489215 ZNF687Q8N1G0 1237 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 EHBP1Q8NDI1 1231 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 FAM81BQ96LP2 452 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 ARID3AQ99856 593 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 RNF38Q9H0F5 515 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 CHRDQ9H2X0 955 aa25.35■■□□□ 1.65
PTPN18-213ENST00000489215 PROB1E7EW31 1015 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 LEFTY2O00292 366 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 MBL2P11226 248 aaPredicted RBP25.34■■□□□ 1.65
PTPN18-213ENST00000489215 ACO1P21399 889 aaKnown RBP25.34■■□□□ 1.65
PTPN18-213ENST00000489215 ERCC5P28715 1186 aaPredicted RBP25.34■■□□□ 1.65
PTPN18-213ENST00000489215 HOXD11P31277 338 aaPredicted RBP25.34■■□□□ 1.65
PTPN18-213ENST00000489215 LRMPQ12912 555 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 ZNF528Q3MIS6 628 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 SGO2Q562F6 1265 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 TADA2BQ86TJ2 420 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 FAM114A1Q8IWE2 563 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 PPM1KQ8N3J5 372 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 ANKRD52Q8NB46 1076 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 TTC16Q8NEE8 873 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 NACA2Q9H009 215 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 SEMA4AQ9H3S1 761 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 HPS4Q9NQG7 708 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 TBC1D14Q9P2M4 693 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 HESX1Q9UBX0 185 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 CPQQ9Y646 472 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 PATJQ8NI35 1801 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 CACNA1HO95180 2353 aa25.34■■□□□ 1.65
PTPN18-213ENST00000489215 NFATC1O95644 943 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 PAEPP09466 180 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 CHRNB1P11230 501 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 VDRP11473 427 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 GCNT1Q02742 428 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 TTC8Q8TAM2 541 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 JAKMIP2Q96AA8 810 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 ECT2Q9H8V3 914 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 GMIPQ9P107 970 aa25.33■■□□□ 1.65
PTPN18-213ENST00000489215 HHLA1C9JL84 531 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 SOX9P48436 509 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 KIF11P52732 1056 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 GOLGA8FQ08AF8 430 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 GOLGA8DPQ0D2H9 430 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 GRSF1Q12849 480 aaKnown RBP eCLIP25.32■■□□□ 1.64
PTPN18-213ENST00000489215 STILQ15468 1287 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 TRIM68Q6AZZ1 485 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 CREBRFQ8IUR6 639 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 ZNF276Q8N554 614 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 LMO3Q8TAP4 145 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 OTUB2Q96DC9 234 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 CNOT6LQ96LI5 555 aaKnown RBP25.32■■□□□ 1.64
PTPN18-213ENST00000489215 CDK5RAP1Q96SZ6 601 aaKnown RBP25.32■■□□□ 1.64
PTPN18-213ENST00000489215 COL4A3Q01955 1670 aa25.32■■□□□ 1.64
PTPN18-213ENST00000489215 E2F8A0AVK6 867 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 TRDMT1O14717 391 aaKnown RBP25.31■■□□□ 1.64
PTPN18-213ENST00000489215 COCHO43405 550 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 ATP5C1P36542 298 aaKnown RBP25.31■■□□□ 1.64
PTPN18-213ENST00000489215 MRE11P49959 708 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 CCR3P51677 355 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 PON2Q15165 354 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 EML3Q32P44 896 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 SMYD5Q6GMV2 418 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 CCDC186Q7Z3E2 898 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 ARHGAP18Q8N392 663 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 CCDC26Q8TAB7 109 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 RIN3Q8TB24 985 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 FAM126AQ9BYI3 521 aaPredicted RBP25.31■■□□□ 1.64
PTPN18-213ENST00000489215 THAP9Q9H5L6 903 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 CYLDQ9NQC7 956 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 FAM86C1Q9NVL1 165 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 WNT6Q9Y6F9 365 aa25.31■■□□□ 1.64
PTPN18-213ENST00000489215 TLR5O60602 858 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 SP9P0CG40 484 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 ARSAP15289 507 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 CD19P15391 556 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 BCAT1P54687 386 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 KLHDC10Q6PID8 442 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 TXNDC11Q6PKC3 985 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 TMEM270Q6UE05 265 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 ENOSF1Q7L5Y1 443 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 ALYREFQ86V81 257 aaKnown RBP25.3■■□□□ 1.64
PTPN18-213ENST00000489215 SPEM1Q8N4L4 309 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 UBR7Q8N806 425 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 SH3BP1Q9Y3L3 701 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms