RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 YIPF1Q9Y548 306 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 PCDHGC5Q9Y5F6 944 aa16.84■□□□□ 0.29
CLDN11-208ENST00000488989 TMEM265A0A087WTH1 108 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 MACROD2A1Z1Q3 448 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 TMEM191CA6NGB0 347 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 PIK3R2O00459 728 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 TRANK1O15050 2925 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 SART1O43290 800 aaKnown RBP16.83■□□□□ 0.28
CLDN11-208ENST00000488989 RTN3O95197 1032 aaPredicted RBP16.83■□□□□ 0.28
CLDN11-208ENST00000488989 ZBED1O96006 694 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 KLRC2P26717 231 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 ELF1P32519 619 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 CA8P35219 290 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 CLCN4P51793 760 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 EFHC1Q5JVL4 640 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 PHLDB2Q86SQ0 1253 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 SIX6OS1Q8N1H7 587 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 MICAL1Q8TDZ2 1067 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 FNIP1Q8TF40 1166 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 PIWIL1Q96J94 861 aaKnown RBP16.83■□□□□ 0.28
CLDN11-208ENST00000488989 SELENOOQ9BVL4 669 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 TTLL2Q9BWV7 592 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 ANAPC1Q9H1A4 1944 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 CHORDC1Q9UHD1 332 aaPredicted RBP16.83■□□□□ 0.28
CLDN11-208ENST00000488989 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.28
CLDN11-208ENST00000488989 GOLGA8SH3BPF8 625 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 BUB1O43683 1085 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 CLASP2O75122 1294 aaKnown RBP16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SOAT2O75908 522 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 GLUD1P00367 558 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 KRT3P12035 628 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 NOP2P46087 812 aaKnown RBP16.82■□□□□ 0.28
CLDN11-208ENST00000488989 FAM102AQ5T9C2 384 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SDHAF4Q5VUM1 108 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 DENND5BQ6ZUT9 1274 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 BEND5Q7L4P6 421 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SLFN11Q7Z7L1 901 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SCAMP5Q8TAC9 235 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 CLEC4CQ8WTT0 213 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SLC22A17Q8WUG5 538 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 IRX2Q9BZI1 471 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-208ENST00000488989 FBXO44Q9H4M3 255 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 METTL5Q9NRN9 209 aaKnown RBP16.82■□□□□ 0.28
CLDN11-208ENST00000488989 LCMT1Q9UIC8 334 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SCML2Q9UQR0 700 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 INSL5Q9Y5Q6 135 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 CAPN6Q9Y6Q1 641 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 OBSL1O75147 1896 aa16.82■□□□□ 0.28
CLDN11-208ENST00000488989 SLC38A8A6NNN8 435 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 KIF5CO60282 957 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 MOCS3O95396 460 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 GJB6O95452 261 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 USP17L7P0C7H9 530 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 RPL7AP62424 266 aaKnown RBP16.81■□□□□ 0.28
CLDN11-208ENST00000488989 PLD1Q13393 1074 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 CCDC149Q6ZUS6 474 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 LRRC57Q8N9N7 239 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 KREMEN2Q8NCW0 462 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 TRIM58Q8NG06 486 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 JOSD2Q8TAC2 188 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 MRPL38Q96DV4 380 aaKnown RBP16.81■□□□□ 0.28
CLDN11-208ENST00000488989 MCEEQ96PE7 176 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 ANAPC7Q9UJX3 599 aa16.81■□□□□ 0.28
CLDN11-208ENST00000488989 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
CLDN11-208ENST00000488989 TRIOBPQ9H2D6 2365 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 GRID2IPA4D2P6 1211 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 C2CD4BA6NLJ0 364 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 DPYSL4O14531 572 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 PRRG1O14668 218 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 BUB1BO60566 1050 aaPredicted RBP16.8■□□□□ 0.28
CLDN11-208ENST00000488989 HSF2BPO75031 334 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 TUBB4AP04350 444 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 CSH1P0DML2 217 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 CSH2P0DML3 217 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 RFC1P35251 1148 aaPredicted RBP16.8■□□□□ 0.28
CLDN11-208ENST00000488989 ALDH1A3P47895 512 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 USP46P62068 366 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 TAF5Q15542 800 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 PTPROQ16827 1216 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 DUSP6Q16828 381 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 TRNP1Q6NT89 227 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 DCUN1D2Q6PH85 259 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 NIPA2Q8N8Q9 360 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 UBE2Q2Q8WVN8 375 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 TRMT2BQ96GJ1 504 aaKnown RBP16.8■□□□□ 0.28
CLDN11-208ENST00000488989 MYRFLQ96LU7 910 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 SLC2A13Q96QE2 648 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 ZNF576Q9H609 170 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 LAMA3Q16787 3333 aa16.8■□□□□ 0.28
CLDN11-208ENST00000488989 DOCK6Q96HP0 2047 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 YJEFN3A6XGL0 299 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 E7ENQ6 273 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms