RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 CYLDQ9NQC7 956 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 NENFQ9UMX5 172 aa12.96□□□□□ -0.33
TRAIP-209ENST00000488860 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-209ENST00000488860 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 TBX10O75333 385 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 GABBR2O75899 941 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ZBED1O96006 694 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 GZMAP12544 262 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 MAGEA1P43355 309 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 KCNC3Q14003 757 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 RAB41Q5JT25 222 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 FAM102AQ5T9C2 384 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ANKRD54Q6NXT1 300 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 DNAJC24Q6P3W2 148 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 DNAJB7Q7Z6W7 309 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 MCOLN2Q8IZK6 566 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 FEZF2Q8TBJ5 459 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 CTNNBL1Q8WYA6 563 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 TRIM11Q96F44 468 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 CEP295NLQ96MC4 621 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 GCNAQ96QF7 691 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 PRKD2Q9BZL6 878 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 THAP2Q9H0W7 228 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ISCUQ9H1K1 167 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 LUC7LQ9NQ29 371 aaKnown RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 METTL5Q9NRN9 209 aaKnown RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 HCFC1R1Q9NWW0 138 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 EHD2Q9NZN4 543 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 GMIPQ9P107 970 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 STRIP2Q9ULQ0 834 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
TRAIP-209ENST00000488860 NUP210Q8TEM1 1887 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-209ENST00000488860 FBXO21O94952 628 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 GJB6O95452 261 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 ABL1P00519 1130 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 MYL4P12829 197 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 RRM1P23921 792 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 GALCP54803 685 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 DAOAP59103 153 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 TAF10Q12962 218 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 PTP4A2Q12974 167 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 ADAM15Q13444 863 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 CLUL1Q15846 466 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 OLFML1Q6UWY5 402 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 RTL10Q7L3V2 364 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 TMEM110Q86TL2 294 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 SCUBE3Q8IX30 993 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 TRIM44Q96DX7 344 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 CNGB3Q9NQW8 809 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 MTMR10Q9NXD2 777 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 TFR2Q9UP52 801 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 SCML2Q9UQR0 700 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 REXO2Q9Y3B8 237 aaKnown RBP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
TRAIP-209ENST00000488860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAIP-209ENST00000488860 NCANO14594 1321 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 A0A1W2PQH9 124 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 NCK2O43639 380 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 GRAP2O75791 330 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 LCA5LO95447 670 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 RHOP08100 348 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 MYBL1P10243 752 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 GABRR2P28476 465 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 GABRB2P47870 512 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 RPL34P49207 117 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 RNASE9P60153 205 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 YWHAGP61981 247 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 KRT83P78385 493 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 NTHL1P78549 312 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-209ENST00000488860 C10orf76Q5T2E6 689 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 SYCE2Q6PIF2 218 aa12.93□□□□□ -0.34
TRAIP-209ENST00000488860 TMEM184AQ6ZMB5 413 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms