RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 TNFAIP8O95379 198 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 MRPS9P82933 396 aaKnown RBP16.82■□□□□ 0.28
MCF2L-229ENST00000488765 HIF1AQ16665 826 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 NEURL2Q9BR09 285 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 ZDHHC7Q9NXF8 308 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 SENP1Q9P0U3 644 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 CASZ1Q86V15 1759 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 GMPRP36959 345 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 SIX5Q8N196 739 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 CENPSQ8N2Z9 138 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 TSPAN14Q8NG11 270 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 SPATA17Q96L03 361 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 TSPAN18Q96SJ8 248 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PPP1R1BQ9UD71 204 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 DAGLAQ9Y4D2 1042 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 F5H6K3 240 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 COPEO14579 308 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 AIM2O14862 343 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 KLRC2P26717 231 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PEX3P56589 373 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 LDLRAP1Q5SW96 308 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 NUDCD3Q8IVD9 361 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 IGDCC3Q8IVU1 814 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 LRRN4Q8WUT4 740 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 CCDC106Q9BWC9 280 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 SIAEQ9HAT2 523 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PLGRKTQ9HBL7 147 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 FAM32AQ9Y421 112 aaKnown RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 EIF3FO00303 357 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 DNALI1O14645 258 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 ITGADQ13349 1161 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 EGFLAMQ63HQ2 1017 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 C16orf46Q6P387 395 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 ZC3H3Q8IXZ2 948 aaKnown RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 Q8N9G6 341 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 RSPH1Q8WYR4 309 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 MRPS26Q9BYN8 205 aaKnown RBP16.81■□□□□ 0.28
MCF2L-229ENST00000488765 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
MCF2L-229ENST00000488765 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 H3BNX3 289 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 ATP2A1O14983 1001 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 NDST2P52849 883 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 E2F7Q96AV8 911 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 SNX27Q96L92 541 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 OSBPL6Q9BZF3 934 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 TIAM2Q8IVF5 1701 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A9O60656 530 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 P4HA1P13674 534 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 CSE1LP55060 971 aaKnown RBP16.8■□□□□ 0.28
MCF2L-229ENST00000488765 BNIP3Q12983 259 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 PDAP1Q13442 181 aaKnown RBP16.8■□□□□ 0.28
MCF2L-229ENST00000488765 PDCD4Q53EL6 469 aaKnown RBP16.8■□□□□ 0.28
MCF2L-229ENST00000488765 NANOGP8Q6NSW7 305 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 FRMD7Q6ZUT3 714 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A7Q9HAW7 530 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A10Q9HAW8 530 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
MCF2L-229ENST00000488765 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-229ENST00000488765 TRIM49D1C9J1S8 452 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 SLITRK3O94933 977 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 SPATA31C1P0DKV0 1188 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CD247P20963 164 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 TCEA1P23193 301 aaKnown RBP16.79■□□□□ 0.28
MCF2L-229ENST00000488765 BCAP31P51572 246 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 SPDYAQ5MJ70 313 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 PHTF2Q8N3S3 785 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CFAP36Q96G28 342 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 KREMEN1Q96MU8 473 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 SPO11Q9Y5K1 396 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 USP17L10C9JJH3 530 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 DCXO43602 365 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 INHBAP08476 426 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CFHP08603 1231 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
MCF2L-229ENST00000488765 ADSSP30520 456 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 COPAP53621 1224 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 NR1H2P55055 460 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 GNA12Q03113 381 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 BFSP1Q12934 665 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 CCNG2Q16589 344 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 MYO1HQ8N1T3 1032 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 PQLC1Q8N2U9 271 aa16.79■□□□□ 0.28
MCF2L-229ENST00000488765 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms