RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 A8MXQ7 604 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 SCAMP3O14828 347 aaKnown RBP20.25■□□□□ 0.83
GGPS1-206ENST00000488594 STAU1O95793 577 aaKnown RBP20.25■□□□□ 0.83
GGPS1-206ENST00000488594 CST3P01034 146 aaPredicted RBP20.25■□□□□ 0.83
GGPS1-206ENST00000488594 PTGER3P43115 390 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
GGPS1-206ENST00000488594 MESP2Q0VG99 397 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 PSMD6Q15008 389 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 MAP7D1Q3KQU3 841 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 LY6G5CQ5SRR4 150 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 EMC10Q5UCC4 262 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 FAM173BQ6P4H8 233 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 PGBD3Q8N328 593 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 PDILTQ8N807 584 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 DEFB124Q8NES8 71 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 HMGB4Q8WW32 186 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 CGRRF1Q99675 332 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 SCNM1Q9BWG6 230 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 CUEDC2Q9H467 287 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 AGPAT3Q9NRZ7 376 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 NME7Q9Y5B8 376 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 ATP8B3O60423 1300 aa20.25■□□□□ 0.83
GGPS1-206ENST00000488594 TCRBV21S2A2A0A5A6 115 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 TBC1D3BA6NDS4 549 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 HOXC11O43248 304 aaPredicted RBP20.24■□□□□ 0.83
GGPS1-206ENST00000488594 ADAM23O75077 832 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 ENGP17813 658 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 SPINK2P20155 84 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 ATICP31939 592 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 HOXD13P35453 343 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 MAPK8P45983 427 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 TUBP50607 506 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 CACNA2D1P54289 1103 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 AMPD3Q01432 767 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 KDSRQ06136 332 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 HECTD3Q5T447 861 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 PEAR1Q5VY43 1037 aaPredicted RBP20.24■□□□□ 0.83
GGPS1-206ENST00000488594 ARMCX6Q7L4S7 300 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 PHTF2Q8N3S3 785 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 CEP76Q8TAP6 659 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 ZNF507Q8TCN5 953 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 FBXO32Q969P5 355 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 B3GNT5Q9BYG0 378 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 DPEP3Q9H4B8 488 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 TMEM74BQ9NUR3 256 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 TMEM30AQ9NV96 361 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 KBTBD4Q9NVX7 518 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 MBD1Q9UIS9 605 aaPredicted RBP20.24■□□□□ 0.83
GGPS1-206ENST00000488594 PILRBQ9UKJ0 227 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 SH3BP1Q9Y3L3 701 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 FRYQ5TBA9 3013 aa20.24■□□□□ 0.83
GGPS1-206ENST00000488594 UPK3BL1B0FP48 263 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 UPK3BL2E5RIL1 263 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 AP5Z1O43299 807 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 COCHO43405 550 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 SYT1P21579 422 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 CYP24A1Q07973 514 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 IFRD2Q12894 506 aaPredicted RBP20.23■□□□□ 0.83
GGPS1-206ENST00000488594 TRPC3Q13507 836 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 SNX30Q5VWJ9 437 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 SLC36A4Q6YBV0 504 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
GGPS1-206ENST00000488594 RABEPKQ7Z6M1 372 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 ETFBKMTQ8IXQ9 262 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 GATA6Q92908 595 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
GGPS1-206ENST00000488594 ZFRQ96KR1 1074 aaKnown RBP20.23■□□□□ 0.83
GGPS1-206ENST00000488594 USP28Q96RU2 1077 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 DEC1Q9P2X7 70 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 NEUROG3Q9Y4Z2 214 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 PTPRDP23468 1912 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 UBE4BO95155 1302 aa20.23■□□□□ 0.83
GGPS1-206ENST00000488594 ATXN3P54252 364 aaPredicted RBP20.22■□□□□ 0.83
GGPS1-206ENST00000488594 FRMD1Q8N878 549 aa20.22■□□□□ 0.83
GGPS1-206ENST00000488594 ZNF513Q8N8E2 541 aaPredicted RBP20.22■□□□□ 0.83
GGPS1-206ENST00000488594 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
GGPS1-206ENST00000488594 COMMD8Q9NX08 183 aa20.22■□□□□ 0.83
GGPS1-206ENST00000488594 NXF1Q9UBU9 619 aaKnown RBP20.22■□□□□ 0.83
GGPS1-206ENST00000488594 RALYQ9UKM9 306 aaKnown RBP20.22■□□□□ 0.83
GGPS1-206ENST00000488594 SLC6A14Q9UN76 642 aa20.22■□□□□ 0.83
GGPS1-206ENST00000488594 CLDN5O00501 218 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ZBTB24O43167 697 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 TGFB1I1O43294 461 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 TULP3O75386 442 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 TOP3BO95985 862 aaKnown RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CFIP05156 583 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ASIC1P78348 528 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 GFPT1Q06210 699 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 SEMA3BQ13214 749 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 DUOXA1Q1HG43 343 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CNNM4Q6P4Q7 775 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 PIP4P1Q86T03 277 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 HDDC3Q8N4P3 179 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 TNIP3Q96KP6 325 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms