RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
SNU13-208ENST00000488571 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 PIGKQ92643 395 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 PNKPQ96T60 521 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 MRPL45Q9BRJ2 306 aaKnown RBP12.11□□□□□ -0.47
SNU13-208ENST00000488571 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 TMEM74BQ9NUR3 256 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 MBD1Q9UIS9 605 aaPredicted RBP12.11□□□□□ -0.47
SNU13-208ENST00000488571 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
SNU13-208ENST00000488571 CPQQ9Y646 472 aa12.11□□□□□ -0.47
SNU13-208ENST00000488571 TRIM66O15016 1216 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 ADAM23O75077 832 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 KAT7O95251 611 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 KLF8O95600 359 aaPredicted RBP12.1□□□□□ -0.47
SNU13-208ENST00000488571 ANXA13P27216 316 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 HOXD13P35453 343 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 EIF2DP41214 584 aaKnown RBP12.1□□□□□ -0.47
SNU13-208ENST00000488571 PTGER3P43115 390 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 TAF10Q12962 218 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 MDH1BQ5I0G3 518 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 PHTF2Q8N3S3 785 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 DEFB124Q8NES8 71 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 GATA6Q92908 595 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 ZFRQ96KR1 1074 aaKnown RBP12.1□□□□□ -0.47
SNU13-208ENST00000488571 SCNM1Q9BWG6 230 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
SNU13-208ENST00000488571 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 TNFRSF10BO14763 440 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 TACC1O75410 805 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 CST3P01034 146 aaPredicted RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 TNNC2P02585 160 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 TXLNAP40222 546 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 PPP3CCP48454 512 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 KDSRQ06136 332 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 RESTQ13127 1097 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 DUOXA2Q1HG44 320 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 UAP1L1Q3KQV9 507 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 HSF5Q4G112 596 aaPredicted RBP12.09□□□□□ -0.47
SNU13-208ENST00000488571 TRIM61Q5EBN2 209 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 TRAPPC11Q7Z392 1133 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 WDR49Q8IV35 697 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 HPS3Q969F9 1004 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 ADAMTS9Q9P2N4 1935 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
SNU13-208ENST00000488571 CACNA1GO43497 2377 aa12.08□□□□□ -0.47
SNU13-208ENST00000488571 PI4KAP42356 2102 aa12.08□□□□□ -0.47
SNU13-208ENST00000488571 MYO18AQ92614 2054 aaKnown RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 ADH1CP00326 375 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 APODP05090 189 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 ADH5P11766 374 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 ENGP17813 658 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 GNL1P36915 607 aaPredicted RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 STAT6P42226 847 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 GRIA2P42262 883 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 CUL4AQ13619 759 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 SURF1Q15526 300 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 EOGTQ5NDL2 527 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 LY6G5CQ5SRR4 150 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 PEAR1Q5VY43 1037 aaPredicted RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 TDRD10Q5VZ19 366 aaKnown RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 ETFBKMTQ8IXQ9 262 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 HMGB4Q8WW32 186 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 SPACA7Q96KW9 195 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 NUSAP1Q9BXS6 441 aaKnown RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 B3GNT5Q9BYG0 378 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
SNU13-208ENST00000488571 ARHGEF4Q9NR80 690 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 EHD2Q9NZN4 543 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 HCN2Q9UL51 889 aa12.08□□□□□ -0.48
SNU13-208ENST00000488571 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms