RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 GALK1P51570 392 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 ELOA2Q8IYF1 753 aaPredicted RBP24.47■■□□□ 1.51
CUL4A-209ENST00000488558 TTC39CQ8N584 583 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 GPR161Q8N6U8 529 aaKnown RBP24.47■■□□□ 1.51
CUL4A-209ENST00000488558 SCAMP5Q8TAC9 235 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 HNRNPABQ99729 332 aaKnown RBP24.47■■□□□ 1.51
CUL4A-209ENST00000488558 NT5C1AQ9BXI3 368 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 FBXO44Q9H4M3 255 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 FAM124BQ9H5Z6 455 aaPredicted RBP24.47■■□□□ 1.51
CUL4A-209ENST00000488558 C2orf42Q9NWW7 574 aa24.47■■□□□ 1.51
CUL4A-209ENST00000488558 CILPO75339 1184 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 EGFP01133 1207 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 FAM200BP0CF97 657 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 ORC1Q13415 861 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 HECTD3Q5T447 861 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 CCDC26Q8TAB7 109 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 SMARCE1Q969G3 411 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 TWNKQ96RR1 684 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 TSG101Q99816 390 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 DUSP9Q99956 384 aaKnown RBP24.46■■□□□ 1.51
CUL4A-209ENST00000488558 LINC00597Q9H2U6 94 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 MMRN2Q9H8L6 949 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 FBRSL1Q9HCM7 1045 aaKnown RBP24.46■■□□□ 1.51
CUL4A-209ENST00000488558 PNPLA8Q9NP80 782 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 FAM49BQ9NUQ9 324 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 RAB23Q9ULC3 237 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 PCDHA5Q9Y5H7 936 aa24.46■■□□□ 1.51
CUL4A-209ENST00000488558 CCDC163A0A0D9SF12 145 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 RNF40O75150 1001 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 MBL2P11226 248 aaPredicted RBP24.45■■□□□ 1.5
CUL4A-209ENST00000488558 FNTBP49356 437 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 LRRC63Q05C16 580 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 DMWDQ09019 674 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 LAIR1Q6GTX8 287 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 PKN3Q6P5Z2 889 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 FILIP1Q7Z7B0 1213 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 WDR5BQ86VZ2 330 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 KIAA2013Q8IYS2 634 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 DCLK2Q8N568 766 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 C12orf29Q8N999 325 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 FBXL13Q8NEE6 735 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 SMPD4Q9NXE4 827 aa24.45■■□□□ 1.5
CUL4A-209ENST00000488558 COCHO43405 550 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 BEST1O76090 585 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 MAP3K7CLP57077 242 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 FKBP3Q00688 224 aaKnown RBP24.44■■□□□ 1.5
CUL4A-209ENST00000488558 NAIF1Q69YI7 327 aaPredicted RBP24.44■■□□□ 1.5
CUL4A-209ENST00000488558 CLEC20AQ6ZU45 233 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 WHAMMQ8TF30 809 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 ZFRQ96KR1 1074 aaKnown RBP24.44■■□□□ 1.5
CUL4A-209ENST00000488558 GMIPQ9P107 970 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 CFAP97Q9P2B7 532 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 TBC1D14Q9P2M4 693 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 GMEB2Q9UKD1 530 aa24.44■■□□□ 1.5
CUL4A-209ENST00000488558 E2F8A0AVK6 867 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 CYP17A1P05093 508 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 ID4P47928 161 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 ADGRG2Q8IZP9 1017 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 EZH1Q92800 747 aaPredicted RBP24.43■■□□□ 1.5
CUL4A-209ENST00000488558 OTUB2Q96DC9 234 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 CYFIP2Q96F07 1278 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 EEF2KMTQ96G04 330 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.43■■□□□ 1.51e-15■■■■■ 136.6
CUL4A-209ENST00000488558 RAB20Q9NX57 234 aa24.43■■□□□ 1.5
CUL4A-209ENST00000488558 CHORDC1Q9UHD1 332 aaPredicted RBP24.43■■□□□ 1.5
CUL4A-209ENST00000488558 CD58P19256 250 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 ADORA2BP29275 332 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 OPRD1P41143 372 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 EIF2DP41214 584 aaKnown RBP24.42■■□□□ 1.5
CUL4A-209ENST00000488558 PPP1R2P41236 205 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 GAB4Q2WGN9 574 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 CAMKK1Q8N5S9 505 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 SEMA4DQ92854 862 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 ACDQ96AP0 544 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 CCSER2Q9H7U1 834 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 TLR8Q9NR97 1041 aaKnown RBP24.42■■□□□ 1.5
CUL4A-209ENST00000488558 SLC8A2Q9UPR5 921 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 SCML2Q9UQR0 700 aa24.42■■□□□ 1.5
CUL4A-209ENST00000488558 HHLA1C9JL84 531 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 HRO43593 1189 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 ADH1CP00326 375 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 STIM1Q13586 685 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 SIM2Q14190 667 aaPredicted RBP24.41■■□□□ 1.5
CUL4A-209ENST00000488558 DHCR24Q15392 516 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 HEATR6Q6AI08 1181 aaKnown RBP24.41■■□□□ 1.5
CUL4A-209ENST00000488558 ANKRD40Q6AI12 368 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 SYT13Q7L8C5 426 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 COQ4Q9Y3A0 265 aa24.41■■□□□ 1.5
CUL4A-209ENST00000488558 DMXL1Q9Y485 3027 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 PSMA7O14818 248 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 TLR5O60602 858 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 PMS1P54277 932 aaKnown RBP24.4■■□□□ 1.5
CUL4A-209ENST00000488558 FOXK2Q01167 660 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 RPLP0P6Q8NHW5 317 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 ERCC4Q92889 916 aaPredicted RBP24.4■■□□□ 1.5
CUL4A-209ENST00000488558 CYLDQ9NQC7 956 aa24.4■■□□□ 1.5
CUL4A-209ENST00000488558 LRP3O75074 770 aa24.39■■□□□ 1.49
CUL4A-209ENST00000488558 RETP07949 1114 aa24.39■■□□□ 1.49
CUL4A-209ENST00000488558 DCAF17Q5H9S7 520 aaPredicted RBP24.39■■□□□ 1.49
CUL4A-209ENST00000488558 TCERG1LQ5VWI1 586 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms