RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 PATE3B3GLJ2 98 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 SGK1O00141 431 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 CDX4O14627 284 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 GIPC1O14908 333 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 MAP3K13O43283 966 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 PHACTR2O75167 634 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 CENPBP07199 599 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 CHRM1P11229 460 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 KIR2DL1P43626 348 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 IRX4P78413 519 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 GAD2Q05329 585 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 HECTD3Q5T447 861 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 UNC13DQ70J99 1090 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 LPCAT2Q7L5N7 544 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 C12orf40Q86WS4 652 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 WHAMMQ8TF30 809 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 PIGKQ92643 395 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 FBXO32Q969P5 355 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 OTUB2Q96DC9 234 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 KCNK16Q96T55 309 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 XYLT2Q9H1B5 865 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 CGNQ9P2M7 1197 aaKnown RBP16.12■□□□□ 0.17
NELFA-215ENST00000488452 THADAQ6YHU6 1953 aa16.12■□□□□ 0.17
NELFA-215ENST00000488452 NUP205Q92621 2012 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 COCHO43405 550 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 CUTAO60888 179 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 CEACAM1P13688 526 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 CSRP1P21291 193 aaKnown RBP16.11■□□□□ 0.17
NELFA-215ENST00000488452 P2RY2P41231 377 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 KDSRQ06136 332 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 EHHADHQ08426 723 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 BYSLQ13895 437 aaKnown RBP16.11■□□□□ 0.17
NELFA-215ENST00000488452 LY6G5CQ5SRR4 150 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 SNX30Q5VWJ9 437 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 SHC4Q6S5L8 630 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 C12orf56Q8IXR9 622 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 RLN3Q8WXF3 142 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 SPACA7Q96KW9 195 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 VRTNQ9H8Y1 702 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 COMMD8Q9NX08 183 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 IL37Q9NZH6 218 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
NELFA-215ENST00000488452 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
NELFA-215ENST00000488452 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
NELFA-215ENST00000488452 ATP8B3O60423 1300 aa16.11■□□□□ 0.17
NELFA-215ENST00000488452 TNFRSF10BO14763 440 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 ADAM23O75077 832 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 PROS1P07225 676 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 AP3M2P53677 418 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 CDH8P55286 799 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 ZNF252P-AS1Q0IIN9 211 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 BMT2Q1RMZ1 405 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 PREPLQ4J6C6 727 aaPredicted RBP16.1■□□□□ 0.17
NELFA-215ENST00000488452 SPDYCQ5MJ68 293 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 BTBD8Q5XKL5 378 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 PAQR9Q6ZVX9 377 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 PGBD3Q8N328 593 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 FRMD1Q8N878 549 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 SCAMP5Q8TAC9 235 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 KCNV2Q8TDN2 545 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 HMGB4Q8WW32 186 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 TNIP3Q96KP6 325 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 ZFRQ96KR1 1074 aaKnown RBP16.1■□□□□ 0.17
NELFA-215ENST00000488452 MED10Q9BTT4 135 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 MAGEF1Q9HAY2 307 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
NELFA-215ENST00000488452 SH3BP1Q9Y3L3 701 aa16.1■□□□□ 0.17
NELFA-215ENST00000488452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 TBC1D3BA6NDS4 549 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 POLR2DO15514 142 aaKnown RBP16.09■□□□□ 0.17
NELFA-215ENST00000488452 EXOC3O60645 756 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 YEATS4O95619 227 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 DPP6P42658 865 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 CASP4P49662 377 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 LMAN2Q12907 356 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 BIRC3Q13489 604 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 KNOP1Q1ED39 458 aaKnown RBP16.09■□□□□ 0.17
NELFA-215ENST00000488452 MAP7D1Q3KQU3 841 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 FAM35AQ86V20 835 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 ETFBKMTQ8IXQ9 262 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 TMEFF1Q8IYR6 380 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 PHTF2Q8N3S3 785 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 NAT16Q8N8M0 369 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 PLEKHO2Q8TD55 490 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 DUSP9Q99956 384 aaKnown RBP16.09■□□□□ 0.17
NELFA-215ENST00000488452 NUSAP1Q9BXS6 441 aaKnown RBP16.09■□□□□ 0.17
NELFA-215ENST00000488452 BLZF1Q9H2G9 400 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 CCSER2Q9H7U1 834 aa16.09■□□□□ 0.17
NELFA-215ENST00000488452 SLC39A2Q9NP94 309 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms