RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TYMPP19971 482 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 KCNA5P22460 613 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 PSMA2P25787 234 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
NELFE-209ENST00000488426 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 RGS7P49802 495 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 PLCB3Q01970 1234 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 DLX2Q07687 328 aaPredicted RBP13.35□□□□□ -0.27
NELFE-209ENST00000488426 OR6B2Q6IFH4 312 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
NELFE-209ENST00000488426 OLFML1Q6UWY5 402 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 FAM183BPQ6ZVS7 135 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 COLGALT2Q8IYK4 626 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 JOSD2Q8TAC2 188 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 LRRC1Q9BTT6 524 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
NELFE-209ENST00000488426 TBC1D13Q9NVG8 400 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 USTQ9Y2C2 406 aa13.35□□□□□ -0.27
NELFE-209ENST00000488426 TRIOO75962 3097 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
NELFE-209ENST00000488426 TULP2O00295 520 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 ATP2C2O75185 946 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 DDHD2O94830 711 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
NELFE-209ENST00000488426 LTBRP36941 435 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 TAS2R40P59535 323 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
NELFE-209ENST00000488426 MDH1BQ5I0G3 518 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 POLNQ7Z5Q5 900 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
NELFE-209ENST00000488426 KRT12Q99456 494 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 ACBD6Q9BR61 282 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 C11orf84Q9BUA3 381 aaPredicted RBP13.34□□□□□ -0.27
NELFE-209ENST00000488426 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 CRTAC1Q9NQ79 661 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 PLXNA4Q9HCM2 1894 aa13.34□□□□□ -0.27
NELFE-209ENST00000488426 F8VP50 259 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 LINC01565O15544 149 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 ERLIN1O75477 346 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 NPR3P17342 541 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 BRCC3P46736 316 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 CLCN6P51797 869 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.27
NELFE-209ENST00000488426 SLC6A3Q01959 620 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 HYAL1Q12794 435 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 KIAA0319Q5VV43 1072 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 ARCQ7LC44 396 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 ZNF280BQ86YH2 543 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.27
NELFE-209ENST00000488426 MYCBPAPQ8TBZ2 947 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 HNRNPLLQ8WVV9 542 aaKnown RBP13.33□□□□□ -0.27
NELFE-209ENST00000488426 CNPY3Q9BT09 278 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 CD320Q9NPF0 282 aa13.33□□□□□ -0.27
NELFE-209ENST00000488426 DDX56Q9NY93 547 aaKnown RBP13.33□□□□□ -0.27
NELFE-209ENST00000488426 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.27
NELFE-209ENST00000488426 C2CD4BA6NLJ0 364 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 DPYSL4O14531 572 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
NELFE-209ENST00000488426 FAM200BP0CF97 657 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 DESP17661 470 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 GPD1P21695 349 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 CETN2P41208 172 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 ERVFC1P60507 584 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 VSNL1P62760 191 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 EMC1Q8N766 993 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 KCTD13Q8WZ19 329 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 UHRF1Q96T88 793 aaPredicted RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 NCAPGQ9BPX3 1015 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 MED10Q9BTT4 135 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 B3GNT5Q9BYG0 378 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 NSUN3Q9H649 340 aaKnown RBP13.33□□□□□ -0.28
NELFE-209ENST00000488426 IGFLR1Q9H665 355 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.28
NELFE-209ENST00000488426 ASNSD1Q9NWL6 643 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 STIM2Q9P246 746 aa13.33□□□□□ -0.28
NELFE-209ENST00000488426 I3L4J1 428 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 FSCN2O14926 492 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 B4GALT3O60512 393 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 LRCH4O75427 683 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 GABBR2O75899 941 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 RNF8O76064 485 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 COPS2P61201 443 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms