RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 EZH1Q92800 747 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-211ENST00000488279 GOLPH3LQ9H4A5 285 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 KRT82Q9NSB4 513 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 CFAP97Q9P2B7 532 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 CDV3Q9UKY7 258 aaKnown RBP23.96■■□□□ 1.43
PTPN4-211ENST00000488279 PTPRDP23468 1912 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ANAPC1Q9H1A4 1944 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 RPP40O75818 363 aaKnown RBP23.95■■□□□ 1.42
PTPN4-211ENST00000488279 CCDC130P13994 396 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ASPAP45381 313 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 GCLMP48507 274 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ENPEPQ07075 957 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ORC1Q13415 861 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ADAM9Q13443 819 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 SNX30Q5VWJ9 437 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 FAM186BQ8IYM0 893 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 ACDQ96AP0 544 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 SEMA4GQ9NTN9 838 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 POLR3BQ9NW08 1133 aaPredicted RBP23.95■■□□□ 1.42
PTPN4-211ENST00000488279 TBC1D14Q9P2M4 693 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 CEP250Q9BV73 2442 aa23.95■■□□□ 1.42
PTPN4-211ENST00000488279 COCHO43405 550 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 DHCR24Q15392 516 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 CACNA2D4Q7Z3S7 1137 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 C12orf29Q8N999 325 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 SMOQ99835 787 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 FBXO44Q9H4M3 255 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 GDPD2Q9HCC8 539 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 CSNK1G1Q9HCP0 422 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.94■■□□□ 1.42
PTPN4-211ENST00000488279 HMGXB4Q9UGU5 601 aa23.94■■□□□ 1.42
PTPN4-211ENST00000488279 CACNA1AO00555 2505 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 FAM92AA1XBS5 289 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 CYP17A1P05093 508 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 TRIM49P0CI25 452 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 TRIM49CP0CI26 452 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 CCDC192P0DO97 292 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 OPRD1P41143 372 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 TUBP50607 506 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 ATXN1P54253 815 aaKnown RBP23.93■■□□□ 1.42
PTPN4-211ENST00000488279 MAP3K7CLP57077 242 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 DMC1Q14565 340 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 CSRP2Q16527 193 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 CCDC150Q8NCX0 1101 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 HHIPQ96QV1 700 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 CYP3A43Q9HB55 503 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 FAM49BQ9NUQ9 324 aa23.93■■□□□ 1.42
PTPN4-211ENST00000488279 E2F8A0AVK6 867 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 K7EQS6 105 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 SCAMP3O14828 347 aaKnown RBP23.92■■□□□ 1.42
PTPN4-211ENST00000488279 AXIN1O15169 862 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 BEST1O76090 585 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 APBB3O95704 486 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 ADH1CP00326 375 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 ZDHHC11BP0C7U3 371 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 FAM200BP0CF97 657 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 PPP3CAQ08209 521 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 GAB4Q2WGN9 574 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 RHBDF2Q6PJF5 856 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 ZMIZ2Q8NF64 920 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 TAS1R2Q8TE23 839 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 LOXL4Q96JB6 756 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 NT5C1AQ9BXI3 368 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 DNAI2Q9GZS0 605 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 NACA2Q9H009 215 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 CCSER2Q9H7U1 834 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 MMRN2Q9H8L6 949 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 GMIPQ9P107 970 aa23.92■■□□□ 1.42
PTPN4-211ENST00000488279 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.92■■□□□ 1.42
PTPN4-211ENST00000488279 FOXD2O60548 495 aaPredicted RBP23.91■■□□□ 1.42
PTPN4-211ENST00000488279 GTF2H1P32780 548 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 INCA1Q0VD86 236 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 EDRF1Q3B7T1 1238 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 C2orf27AQ580R0 203 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 OTUB2Q96DC9 234 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 CYFIP2Q96F07 1278 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 PNKPQ96T60 521 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 HNRNPABQ99729 332 aaKnown RBP23.91■■□□□ 1.42
PTPN4-211ENST00000488279 APOBEC3GQ9HC16 384 aaKnown RBP23.91■■□□□ 1.42
PTPN4-211ENST00000488279 TMEM8AQ9HCN3 771 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 EBF1Q9UH73 591 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 SH3BP1Q9Y3L3 701 aa23.91■■□□□ 1.42
PTPN4-211ENST00000488279 ADORA2BP29275 332 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 EIF2DP41214 584 aaKnown RBP23.9■■□□□ 1.42
PTPN4-211ENST00000488279 SEC13P55735 322 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 ZCWPW2Q504Y3 356 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 PRR23CQ6ZRP0 262 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 KBTBD6Q86V97 674 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 USP33Q8TEY7 942 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 ZFRQ96KR1 1074 aaKnown RBP23.9■■□□□ 1.42
PTPN4-211ENST00000488279 RTKNQ9BST9 563 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 NIF3L1Q9GZT8 377 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 TLR8Q9NR97 1041 aaKnown RBP23.9■■□□□ 1.42
PTPN4-211ENST00000488279 RMND1Q9NWS8 449 aa23.9■■□□□ 1.42
PTPN4-211ENST00000488279 MED19A0JLT2 244 aaPredicted RBP23.89■■□□□ 1.41
PTPN4-211ENST00000488279 GOLGA6L4A6NEF3 574 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 CD58P19256 250 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 SLC6A11P48066 632 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 KRT39Q6A163 491 aa23.89■■□□□ 1.41
PTPN4-211ENST00000488279 SMYD4Q8IYR2 804 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms