RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SLC4A11Q8NBS3 891 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 ATP2A3Q93084 1043 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 NACA2Q9H009 215 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 CLSTN2Q9H4D0 955 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 IL37Q9NZH6 218 aa25.07■■□□□ 1.6
RNF38-208ENST00000488058 CACNA1IQ9P0X4 2223 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 SCAMP3O14828 347 aaKnown RBP25.06■■□□□ 1.6
RNF38-208ENST00000488058 GFRA3O60609 400 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 OLFM2O95897 454 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 TCF3P15923 654 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 YWHAEP62258 255 aaKnown RBP25.06■■□□□ 1.6
RNF38-208ENST00000488058 CETN1Q12798 172 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 TSSK4Q6SA08 328 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 NT5C1BQ96P26 610 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 DUSP16Q9BY84 665 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 LINC00597Q9H2U6 94 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 CCSER2Q9H7U1 834 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 ECT2Q9H8V3 914 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 CFAP97Q9P2B7 532 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 CACNA1HO95180 2353 aa25.06■■□□□ 1.6
RNF38-208ENST00000488058 HHLA1C9JL84 531 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 COCHO43405 550 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 FGFR1OPO95684 399 aaKnown RBP25.05■■□□□ 1.6
RNF38-208ENST00000488058 TBXAS1P24557 533 aaPredicted RBP25.05■■□□□ 1.6
RNF38-208ENST00000488058 AMPD2Q01433 879 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 EML3Q32P44 896 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 DGKKQ5KSL6 1271 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 NKD2Q969F2 451 aaPredicted RBP25.05■■□□□ 1.6
RNF38-208ENST00000488058 TLR8Q9NR97 1041 aaKnown RBP25.05■■□□□ 1.6
RNF38-208ENST00000488058 RWDD2AQ9UIY3 292 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 FBXO4Q9UKT5 387 aa25.05■■□□□ 1.6
RNF38-208ENST00000488058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.05■■□□□ 1.6
RNF38-208ENST00000488058 FAM92AA1XBS5 289 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 PROB1E7EW31 1015 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 CYP26A1O43174 497 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 CCDC192P0DO97 292 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 CD19P15391 556 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 KCNH2Q12809 1159 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 ZC3H14Q6PJT7 736 aaKnown RBP25.04■■□□□ 1.6
RNF38-208ENST00000488058 Q6ZS52 159 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 TRIM59Q8IWR1 403 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 PPM1KQ8N3J5 372 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 IER2Q9BTL4 223 aa25.04■■□□□ 1.6
RNF38-208ENST00000488058 FAM124BQ9H5Z6 455 aaPredicted RBP25.04■■□□□ 1.6
RNF38-208ENST00000488058 NFATC1O95644 943 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 AFPP02771 609 aaKnown RBP25.03■■□□□ 1.6
RNF38-208ENST00000488058 ZDHHC11BP0C7U3 371 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 GJA4P35212 333 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 PGFP49763 221 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 GRSF1Q12849 480 aaKnown RBP eCLIP25.03■■□□□ 1.6
RNF38-208ENST00000488058 NR1H3Q13133 447 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 SNX30Q5VWJ9 437 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 DDX42Q86XP3 938 aaKnown RBP eCLIP25.03■■□□□ 1.6
RNF38-208ENST00000488058 NUP62CLQ9H1M0 184 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 PNPLA8Q9NP80 782 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 SCML2Q9UQR0 700 aa25.03■■□□□ 1.6
RNF38-208ENST00000488058 P4HA2O15460 535 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 TLR5O60602 858 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 IRF1P10914 325 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 TUBP50607 506 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 CCR3P51677 355 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 GAS6Q14393 721 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 GOLGA7BQ2TAP0 167 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 ARHGAP17Q68EM7 881 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 NAIF1Q69YI7 327 aaPredicted RBP25.02■■□□□ 1.6
RNF38-208ENST00000488058 ASCL5Q7RTU5 278 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 CHFRQ96EP1 664 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 PRMT8Q9NR22 394 aaPredicted RBP25.02■■□□□ 1.6
RNF38-208ENST00000488058 SH3BP1Q9Y3L3 701 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 PCDHB4Q9Y5E5 795 aa25.02■■□□□ 1.6
RNF38-208ENST00000488058 PRR23AA6NEV1 266 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 PMM2O15305 246 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 MARSP56192 900 aaKnown RBP25.01■■□□□ 1.59
RNF38-208ENST00000488058 SLC8A3P57103 927 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 CCINQ13939 588 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 TPD52L1Q16890 204 aaPredicted RBP25.01■■□□□ 1.59
RNF38-208ENST00000488058 ZNF528Q3MIS6 628 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 SGO2Q562F6 1265 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 FSTL4Q6MZW2 842 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 TMEM270Q6UE05 265 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 MLKLQ8NB16 471 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 EXOC4Q96A65 974 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 CNOT6LQ96LI5 555 aaKnown RBP25.01■■□□□ 1.59
RNF38-208ENST00000488058 P2RY13Q9BPV8 354 aa25.01■■□□□ 1.59
RNF38-208ENST00000488058 A0A1W2PQH9 124 aa25■■□□□ 1.59
RNF38-208ENST00000488058 TRDMT1O14717 391 aaKnown RBP25■■□□□ 1.59
RNF38-208ENST00000488058 SLC9A3R1O14745 358 aaPredicted RBP25■■□□□ 1.59
RNF38-208ENST00000488058 CXCL12P48061 93 aa25■■□□□ 1.59
RNF38-208ENST00000488058 GALK1P51570 392 aa25■■□□□ 1.59
RNF38-208ENST00000488058 KIF11P52732 1056 aa25■■□□□ 1.59
RNF38-208ENST00000488058 SATB1Q01826 763 aa25■■□□□ 1.59
RNF38-208ENST00000488058 PPP2R5DQ14738 602 aa25■■□□□ 1.59
RNF38-208ENST00000488058 TMEM196Q5HYL7 178 aa25■■□□□ 1.59
RNF38-208ENST00000488058 CLEC17AQ6ZS10 378 aa25■■□□□ 1.59
RNF38-208ENST00000488058 RRAGAQ7L523 313 aa25■■□□□ 1.59
RNF38-208ENST00000488058 ARHGEF19Q8IW93 802 aa25■■□□□ 1.59
RNF38-208ENST00000488058 SPEM1Q8N4L4 309 aa25■■□□□ 1.59
RNF38-208ENST00000488058 UBR7Q8N806 425 aa25■■□□□ 1.59
RNF38-208ENST00000488058 EHBP1Q8NDI1 1231 aa25■■□□□ 1.59
RNF38-208ENST00000488058 LMO3Q8TAP4 145 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms