RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 GMIPQ9P107 970 aa11.9□□□□□ -0.5
RAB11FIP3-210ENST00000487899 SDK1Q7Z5N4 2213 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ANTXRLA6NF34 631 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HHLA1C9JL84 531 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 COCHO43405 550 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HRO43593 1189 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 NFATC1O95644 943 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 P4HA1P13674 534 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DRD1P21728 446 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 YWHAQP27348 245 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TUBP50607 506 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GALK1P51570 392 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MESP2Q0VG99 397 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SNX30Q5VWJ9 437 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 LAIR1Q6GTX8 287 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 WDR5BQ86VZ2 330 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 UNC93AQ86WB7 457 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CRYBG2Q8N1P7 616 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KIAA1958Q8N8K9 716 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PDZD8Q8NEN9 1154 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 WHAMMQ8TF30 809 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SEMA4DQ92854 862 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CD101Q93033 1021 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CCDC47Q96A33 483 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CCSER2Q9H7U1 834 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TMEM8AQ9HCN3 771 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DLL3Q9NYJ7 618 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CFAP97Q9P2B7 532 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CKAP5Q14008 2032 aa11.89□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SPTBN2O15020 2390 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CILPO75339 1184 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ABL1P00519 1130 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MBL2P11226 248 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PXNP49023 591 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 COBLL1Q53SF7 1204 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 C12orf40Q86WS4 652 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SFTPA1Q8IWL2 248 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ABCA7Q8IZY2 2146 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 WBP2Q969T9 261 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ARID3AQ99856 593 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 IMPG2Q9BZV3 1241 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CCDC163A0A0D9SF12 145 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CYP26A1O43174 497 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KRT13P13646 458 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CD58P19256 250 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADORA2BP29275 332 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CNR2P34972 360 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PSMC2P35998 433 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PRCPP42785 496 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MXI1P50539 228 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PMS1P54277 932 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 AMPD2Q01433 879 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ADAM9Q13443 819 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SIM2Q14190 667 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FBXO43Q4G163 708 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CBWD6Q4V339 395 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CBWD3Q5JTY5 395 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CBWD5Q5RIA9 395 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 PHTF2Q8N3S3 785 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FAM160A2Q8N612 972 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GAB3Q8WWW8 586 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DUSP9Q99956 384 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 OSER1Q9NX31 292 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GMEB2Q9UKD1 530 aa11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TP53BP1Q12888 1972 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-210ENST00000487899 E2F8A0AVK6 867 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 K7EQS6 105 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GREM1O60565 184 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 TLR5O60602 858 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 FAM200BP0CF97 657 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 RPL13P26373 211 aaKnown RBP11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 GTF2H1P32780 548 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DHCR24Q15392 516 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 HECTD3Q5T447 861 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 KRT39Q6A163 491 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 SYT13Q7L8C5 426 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 ACDQ96AP0 544 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 NT5C1AQ9BXI3 368 aa11.86□□□□□ -0.51
RAB11FIP3-210ENST00000487899 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms