RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CLEC20AQ6ZU45 233 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 SYNPOQ8N3V7 929 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 SPEM1Q8N4L4 309 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 CPA6Q8N4T0 437 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 TTC39CQ8N584 583 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 ARID3AQ99856 593 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
SPEN-205ENST00000487496 DNAI2Q9GZS0 605 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 FBRSL1Q9HCM7 1045 aaKnown RBP12.12□□□□□ -0.47
SPEN-205ENST00000487496 CISHQ9NSE2 258 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 SMPD4Q9NXE4 827 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 GMIPQ9P107 970 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 PCDHGA2Q9Y5H1 932 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 CPQQ9Y646 472 aa12.12□□□□□ -0.47
SPEN-205ENST00000487496 ZNF638Q14966 1978 aaKnown RBP12.12□□□□□ -0.47
SPEN-205ENST00000487496 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 COCHO43405 550 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 ZDHHC11BP0C7U3 371 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 MBL2P11226 248 aaPredicted RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 TDGF1P13385 188 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 CXCL12P48061 93 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 PGFP49763 221 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 GALK1P51570 392 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 SATB1Q01826 763 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 GRSF1Q12849 480 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPEN-205ENST00000487496 PPP2R5DQ14738 602 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 HECTD3Q5T447 861 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 PPP1R26Q5T8A7 1209 aaPredicted RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 ATRIPQ8WXE1 791 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 FBXO44Q9H4M3 255 aa12.11□□□□□ -0.47
SPEN-205ENST00000487496 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
SPEN-205ENST00000487496 BICDL2A1A5D9 508 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 NFATC1O95644 943 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 FMO5P49326 533 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 TUBP50607 506 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 RAD23BP54727 409 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 STX17P56962 302 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 NR1H3Q13133 447 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 CUL2Q13617 745 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 CAMK4Q16566 473 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 CCDC40Q4G0X9 1142 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
SPEN-205ENST00000487496 GPRIN1Q7Z2K8 1008 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 ADGRG2Q8IZP9 1017 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 JAKMIP2Q96AA8 810 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 P2RY13Q9BPV8 354 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 DUSP16Q9BY84 665 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 FAM126AQ9BYI3 521 aaPredicted RBP12.1□□□□□ -0.47
SPEN-205ENST00000487496 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 C2orf42Q9NWW7 574 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 CTNND2Q9UQB3 1225 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
SPEN-205ENST00000487496 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 PMM2O15305 246 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 LILRB5O75023 590 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 EGFP01133 1207 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 ACO1P21399 889 aaKnown RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 DRD1P21728 446 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 NRLP54845 237 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 LRMPQ12912 555 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 PAK1Q13153 545 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPEN-205ENST00000487496 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 CD101Q93033 1021 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 EXOC4Q96A65 974 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 TLR8Q9NR97 1041 aaKnown RBP12.09□□□□□ -0.47
SPEN-205ENST00000487496 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
SPEN-205ENST00000487496 FAM186AA6NE01 2351 aa12.08□□□□□ -0.47
SPEN-205ENST00000487496 E2F8A0AVK6 867 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 K7ESF4 209 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 CYP26A1O43174 497 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 TLR5O60602 858 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 GNA14O95837 355 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 TBX18O95935 607 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 CYP17A1P05093 508 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 303.6 ms