RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ZFRQ96KR1 1074 aaKnown RBP12.95□□□□□ -0.34
VPS16-208ENST00000487461 SMOC1Q9H4F8 434 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 INVSQ9Y283 1065 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 TPRP12270 2363 aaKnown RBP12.94□□□□□ -0.34
VPS16-208ENST00000487461 ATP8B3O60423 1300 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 TM4SF5O14894 197 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 BEST1O76090 585 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CLSTN1O94985 981 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 RPN1P04843 607 aaKnown RBP12.94□□□□□ -0.34
VPS16-208ENST00000487461 PGFP49763 221 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 DGKEP52429 567 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 SLC5A3P53794 718 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 ZACNQ401N2 412 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 AASDHQ4L235 1098 aaPredicted RBP12.94□□□□□ -0.34
VPS16-208ENST00000487461 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
VPS16-208ENST00000487461 PDZD8Q8NEN9 1154 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 ZMIZ2Q8NF64 920 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 TSTD1Q8NFU3 115 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 WBP2Q969T9 261 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 TNIP3Q96KP6 325 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CNTNAP3BQ96NU0 1288 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 SMOQ99835 787 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 CCSER2Q9H7U1 834 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
VPS16-208ENST00000487461 GMIPQ9P107 970 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 HMGXB4Q9UGU5 601 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 PCDHGA5Q9Y5G8 931 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
VPS16-208ENST00000487461 A0A0A0MRY4 1105 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 FAM92AA1XBS5 289 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 AP1G2O75843 785 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 RHOBTB1O94844 696 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 ADRB1P08588 477 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
VPS16-208ENST00000487461 CCDC130P13994 396 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 HNRNPLP14866 589 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS16-208ENST00000487461 NDST1P52848 882 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 LIMK1P53667 647 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS16-208ENST00000487461 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 SLC2A14Q8TDB8 520 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 TAF4BQ92750 862 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 SMARCD1Q96GM5 515 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 PNKPQ96T60 521 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS16-208ENST00000487461 KRT82Q9NSB4 513 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 MMP17Q9ULZ9 603 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
VPS16-208ENST00000487461 EML5Q05BV3 1969 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 MYOFQ9NZM1 2061 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
VPS16-208ENST00000487461 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 IKBKBO14920 756 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
VPS16-208ENST00000487461 KAT7O95251 611 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ADH1CP00326 375 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
VPS16-208ENST00000487461 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 MYL1P05976 194 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ADH5P11766 374 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 P4HA1P13674 534 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 MPLP40238 635 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 SYKP43405 635 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ASPAP45381 313 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 VAMP7P51809 220 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 NDUFA8P51970 172 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 MAP3K7CLP57077 242 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 MRPS21P82921 87 aaKnown RBP12.92□□□□□ -0.34
VPS16-208ENST00000487461 ELF2Q15723 593 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 CRY1Q16526 586 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 UNC93AQ86WB7 457 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
VPS16-208ENST00000487461 CSNK1G1Q9HCP0 422 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms