RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SEC13P55735 322 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 ADAM9Q13443 819 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 DMC1Q14565 340 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 DHCR24Q15392 516 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 CSRP2Q16527 193 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 NFIL3Q16649 462 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 SYT13Q7L8C5 426 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
SREBF1-215ENST00000487401 MMRN2Q9H8L6 949 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 GMIPQ9P107 970 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 TBC1D14Q9P2M4 693 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
SREBF1-215ENST00000487401 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 COCHO43405 550 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 CYP17A1P05093 508 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 ADORA2BP29275 332 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 ASPAP45381 313 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 ENPEPQ07075 957 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 C1orf220Q5T0J3 134 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 SNX30Q5VWJ9 437 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 C12orf29Q8N999 325 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 EZH1Q92800 747 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-215ENST00000487401 LOXL4Q96JB6 756 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 PNKPQ96T60 521 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 SMOQ99835 787 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 FAM49BQ9NUQ9 324 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 IL37Q9NZH6 218 aa13.18□□□□□ -0.3
SREBF1-215ENST00000487401 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
SREBF1-215ENST00000487401 SPTBN4Q9H254 2564 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 K7EQS6 105 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 APODP05090 189 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 ADH5P11766 374 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 GTF2H1P32780 548 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 OPRD1P41143 372 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 SLC6A11P48066 632 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 TUBP50607 506 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 DGKEP52429 567 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 BECN1Q14457 450 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 BTBD8Q5XKL5 378 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 RHBDF2Q6PJF5 856 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 PRR23CQ6ZRP0 262 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 KBTBD6Q86V97 674 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 NETO1Q8TDF5 533 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 NIF3L1Q9GZT8 377 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 CCSER2Q9H7U1 834 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 APOBEC3GQ9HC16 384 aaKnown RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 TMEM8AQ9HCN3 771 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 CSNK1G1Q9HCP0 422 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
SREBF1-215ENST00000487401 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 OTOGLQ3ZCN5 2332 aa13.17□□□□□ -0.3
SREBF1-215ENST00000487401 COL4A2P08572 1712 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 FAM92AA1XBS5 289 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 DCDC2BA2VCK2 349 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 CETN3O15182 167 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 STX10O60499 249 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 TLR5O60602 858 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 BEST1O76090 585 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 RHOBTB1O94844 696 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 ZDHHC11BP0C7U3 371 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
SREBF1-215ENST00000487401 CD58P19256 250 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 GRIA2P42262 883 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
SREBF1-215ENST00000487401 GAD2Q05329 585 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 ELF2Q15723 593 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 GAB4Q2WGN9 574 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 KRT39Q6A163 491 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
SREBF1-215ENST00000487401 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 JAKMIP2Q96AA8 810 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 CYFIP2Q96F07 1278 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
SREBF1-215ENST00000487401 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms