RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 VPS50Q96JG6 964 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 SLITRK1Q96PX8 696 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 AP4S1Q9Y587 144 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 KANSL1LA0AUZ9 987 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 CCL15Q16663 113 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 CCDC92Q53HC0 331 aaPredicted RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 ACOT1Q86TX2 421 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 ZSCAN5CA6NGD5 496 aaPredicted RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 CYP2B6P20813 491 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 ZNF844Q08AG5 666 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 TRMT5Q32P41 509 aaKnown RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 MGAT5BQ3V5L5 792 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
EPHB4-206ENST00000487222 UGT3A1Q6NUS8 523 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
EPHB4-206ENST00000487222 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 GOLGA8TH3BQL2 631 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 VCAM1P19320 739 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ST8SIA6P61647 398 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 TRIM60Q495X7 471 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 MCOLN2Q8IZK6 566 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ZNF786Q8N393 782 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 HDAC7Q8WUI4 952 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 PNMA5Q96PV4 448 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 DCLK3Q9C098 648 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 EXOSC4Q9NPD3 245 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 KCND1Q9NSA2 647 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 RUVBL2Q9Y230 463 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 USP1O94782 785 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 CPA3P15088 417 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ACO1P21399 889 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 HARS2P49590 506 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 NUP107P57740 925 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 SGO1Q5FBB7 561 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 DEPDC1Q5TB30 811 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 PCNX4Q63HM2 1172 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 BBS7Q8IWZ6 715 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ATP6V0D2Q8N8Y2 350 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 B4GALNT2Q8NHY0 566 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 TRMT6Q9UJA5 497 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 V9GYQ6 96 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 SPATA31D1Q6ZQQ2 1576 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ATP6V1G2O95670 118 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 BGNP21810 368 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 RAP1GDS1P52306 607 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 BCAT1P54687 386 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 ORC1Q13415 861 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 SLC5A5Q92911 643 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 SLC35C1Q96A29 364 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 PSMC6P62333 389 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 NUDT18Q6ZVK8 323 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 THUMPD3Q9BV44 507 aaKnown RBP15.19■□□□□ 0.02
EPHB4-206ENST00000487222 PALMDQ9NP74 551 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 GDF3Q9NR23 364 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 GPATCH2LQ9NWQ4 482 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 AP4E1Q9UPM8 1137 aa15.19■□□□□ 0.02
EPHB4-206ENST00000487222 HEATR9A2RTY3 570 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 AP1G2O75843 785 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 SASH3O75995 380 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 IL1R1P14778 569 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 PSMC3P17980 439 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 ZNF157P51786 506 aaPredicted RBP15.18■□□□□ 0.02
EPHB4-206ENST00000487222 PTPN11Q06124 597 aaPredicted RBP15.18■□□□□ 0.02
EPHB4-206ENST00000487222 TTLL9Q3SXZ7 439 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 TMEM119Q4V9L6 283 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 PLEKHA8Q96JA3 519 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 ACOT9Q9Y305 439 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 NWD1Q149M9 1564 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 VWA5AO00534 786 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 PGK2P07205 417 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 MYL6P60660 151 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 MRPL28Q13084 256 aaKnown RBP15.18■□□□□ 0.02
EPHB4-206ENST00000487222 C10orf120Q5SQS8 335 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 TRIM69Q86WT6 500 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 CREG2Q8IUH2 290 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 RXFP2Q8WXD0 754 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 PGM2Q96G03 612 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 VCPIP1Q96JH7 1222 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 BRD8Q9H0E9 1235 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
EPHB4-206ENST00000487222 ZCCHC18P0CG32 403 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 WASHC2DQ5SRD0 308 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 STRA8Q7Z7C7 330 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
EPHB4-206ENST00000487222 ZNF333Q96JL9 665 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 ZFYVE28Q9HCC9 887 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 CHST12Q9NRB3 414 aa15.18■□□□□ 0.02
EPHB4-206ENST00000487222 EIF3LQ9Y262 564 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms