RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 KAT6AQ92794 2004 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ARHGEF37A1IGU5 675 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 RGL2O15211 777 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PDGFRBP09619 1106 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SLC5A2P31639 672 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CA8P35219 290 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 RFC1P35251 1148 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 FAM91A1Q658Y4 838 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PDPK2PQ6A1A2 396 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 DNAJC24Q6P3W2 148 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 POTEHQ6S545 545 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 MFSD7Q6UXD7 560 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 RFX6Q8HWS3 928 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 FBXL13Q8NEE6 735 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ATP2A3Q93084 1043 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 KREMEN1Q96MU8 473 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TRPV6Q9H1D0 765 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 KCNQ5Q9NR82 932 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 GID8Q9NWU2 228 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TRNAU1APQ9NX07 287 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TUBA8Q9NY65 449 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 IP6K2Q9UHH9 426 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SORCS3Q9UPU3 1222 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 GNEQ9Y223 722 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SH3PXD2BA1X283 911 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 DENND3A2RUS2 1198 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TISP43B9A030 160 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 KBTBD13C9JR72 458 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 E9PBE3 544 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 MSH4O15457 936 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PEX1O43933 1283 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CCNT2O60583 730 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TFPTP0C1Z6 253 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 GYS1P13807 737 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 IDO1P14902 403 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 NELFEP18615 380 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CDH3P22223 829 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 VARSP26640 1264 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PCSK6P29122 969 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 HOXA13P31271 388 aaPredicted RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 ELK3P41970 407 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 NUDT2P50583 147 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SNAP25P60880 206 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PRAMEP78395 509 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PDK1Q15118 436 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 NFIL3Q16649 462 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 AOC3Q16853 763 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 BBS5Q8N3I7 341 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CCDC24Q8N4L8 307 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 METTL25Q8N6Q8 603 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 PLEKHO2Q8TD55 490 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 DCAKDQ8WVC6 231 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SREK1Q8WXA9 508 aaKnown RBP6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SHC3Q92529 594 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CSRNP1Q96S65 589 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 EBF4Q9BQW3 602 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 C1orf21Q9H246 121 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 EPS15L1Q9UBC2 864 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 EXOC7Q9UPT5 735 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 TRIM17Q9Y577 477 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 CLUHO75153 1309 aa6.48□□□□□ -1.37
VPS13D-209ENST00000487188 SF3B1O75533 1304 aaKnown RBP eCLIP6.48□□□□□ -1.374e-7■■■■■ 86.2
VPS13D-209ENST00000487188 CACNA1SQ13698 1873 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 HTR3EA5X5Y0 456 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 CAPN14A8MX76 684 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ESRRBO95718 433 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ECE1P42892 770 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 STT3AP46977 705 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ATP13A4Q4VNC1 1196 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 SPOCD1Q6ZMY3 1216 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 TMEM110Q86TL2 294 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ZNF410Q86VK4 478 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 SLC26A11Q86WA9 606 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 BORCS5Q969J3 196 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 RMND5BQ96G75 393 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-209ENST00000487188 AMNQ9BXJ7 453 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 C10orf88Q9H8K7 445 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ZNF395Q9H8N7 513 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-209ENST00000487188 TUFT1Q9NNX1 390 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 PCDHB4Q9Y5E5 795 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ZHX2Q9Y6X8 837 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 RGPD3A6NKT7 1758 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-209ENST00000487188 RGPD4Q7Z3J3 1758 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 FBP2O00757 339 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 PPP1R11O60927 126 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-209ENST00000487188 HLA-DOAP06340 250 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 CPA3P15088 417 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ACADVLP49748 655 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 SLC5A3P53794 718 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 WASHC5Q12768 1159 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 PEX6Q13608 980 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 ALCAMQ13740 583 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 CEP55Q53EZ4 464 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 FNBP1LQ5T0N5 605 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 MOXD1Q6UVY6 613 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 FBXO11Q86XK2 927 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 FBXW8Q8N3Y1 598 aa6.47□□□□□ -1.37
VPS13D-209ENST00000487188 PPWD1Q96BP3 646 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms