RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 CGRRF1Q99675 332 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 SEPT5Q99719 369 aaPredicted RBP6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 SEMA4CQ9C0C4 833 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 GOLPH3LQ9H4A5 285 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 SLC32A1Q9H598 525 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 GDPD2Q9HCC8 539 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 L1RE1Q9UN81 338 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 SLC27A5Q9Y2P5 690 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 ASB3Q9Y575 518 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 SNX9Q9Y5X1 595 aa6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 ZNF638Q14966 1978 aaKnown RBP6.88□□□□□ -1.31
CTDSPL-208ENST00000486978 UPK3BL1B0FP48 263 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 UPK3BL2E5RIL1 263 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PDXKO00764 312 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 GABRDO14764 452 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 SH3BP5O60239 455 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 EXOC3O60645 756 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 SOAT2O75908 522 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 RHOBTB3O94955 611 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ZNF202O95125 648 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 KIF20AO95235 890 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 FGF19O95750 216 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 TNNI1P19237 187 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PCSK1P29120 753 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 GBP1P32455 592 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PTGER3P43115 390 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 LHX1P48742 406 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 DHPSP49366 369 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 MYL7Q01449 175 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 DPYDQ12882 1025 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 VEPH1Q14D04 833 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ELF2Q15723 593 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 NFE2Q16621 373 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 MGAT5BQ3V5L5 792 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 TMEM196Q5HYL7 178 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ARMCX6Q7L4S7 300 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 TRAPPC11Q7Z392 1133 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 CYP2U1Q7Z449 544 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 LIMS2Q7Z4I7 341 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 SLC9A9Q8IVB4 645 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ADGRF2Q8IZF7 708 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 SYNPOQ8N3V7 929 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 TMEM174Q8WUU8 243 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 RLN3Q8WXF3 142 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ADAMTS14Q8WXS8 1223 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PSMG2Q969U7 264 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 CCDC127Q96BQ5 260 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 CCDC34Q96HJ3 373 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 HPDLQ96IR7 371 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ACBD6Q9BR61 282 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 GZF1Q9H116 711 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 KCTD10Q9H3F6 313 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 CLMPQ9H6B4 373 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 DMAC2Q9NW81 257 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 DDX43Q9NXZ2 648 aaKnown RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ABI2Q9NYB9 513 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 EBF1Q9UH73 591 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 EVLQ9UI08 416 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PCDHB5Q9Y5E4 795 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 PLXND1Q9Y4D7 1925 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 ANKRD17O75179 2603 aaKnown RBP6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
CTDSPL-208ENST00000486978 A0A1W2PRU2 124 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 GOLGA6L4A6NEF3 574 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 TRABD2BA6NFA1 517 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 NR3C1P04150 777 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 HAPLN1P10915 354 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ATF6P18850 670 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ACAT1P24752 427 aaKnown RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 CDR1P51861 262 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 DGKEP52429 567 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 KCNB1Q14721 858 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 TRIP6Q15654 476 aaKnown RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ZNF423Q2M1K9 1284 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 SOWAHAQ2M3V2 549 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ARHGAP15Q53QZ3 475 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 GAREM2Q75VX8 874 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 DNAJB7Q7Z6W7 309 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 OSTM1Q86WC4 334 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ARID3BQ8IVW6 561 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 FAM200AQ8TCP9 573 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 PARD3BQ8TEW8 1205 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 GCNAQ96QF7 691 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 PKMYT1Q99640 499 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 LPIN3Q9BQK8 851 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 PI4K2AQ9BTU6 479 aa6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 SMG9Q9H0W8 520 aaKnown RBP6.86□□□□□ -1.31
CTDSPL-208ENST00000486978 SLITRK6Q9H5Y7 841 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms