RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SLC25A52Q3SY17 297 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ZFYVE27Q5T4F4 411 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 TXNRD3NBQ6F5E7 133 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 LRIG3Q6UXM1 1119 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 CEP128Q6ZU80 1094 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 IQCKQ8N0W5 287 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 SLC35B2Q8TB61 432 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 FAF2Q96CS3 445 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 PCED1BQ96HM7 432 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 HERPUD2Q9BSE4 406 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 CHST7Q9NS84 486 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 ZDHHC18Q9NUE0 388 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 RCOR3Q9P2K3 495 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 MTRF1LQ9UGC7 380 aaKnown RBP12.17□□□□□ -0.46
PRKCB-207ENST00000486868 STAP1Q9ULZ2 295 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 INPP5FQ9Y2H2 1132 aa12.17□□□□□ -0.46
PRKCB-207ENST00000486868 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 APOC4-APOC2K7ER74 178 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 OPA1O60313 960 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 PPFIA2O75334 1257 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ZNF189O75820 626 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 AP1G2O75843 785 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 DDHD2O94830 711 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 APOC2P02655 101 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 IGFBP6P24592 240 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ZNF135P52742 658 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 YWHAZP63104 245 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 SMARCB1Q12824 385 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 OASLQ15646 514 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 PKN2Q16513 984 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 DPYSL2Q16555 572 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 HSP90B2PQ58FF3 399 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 CFAP58Q5T655 872 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 DAB2IPQ5VWQ8 1189 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 PM20D1Q6GTS8 502 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 NPAS4Q8IUM7 802 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 DCP1BQ8IZD4 617 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ABI1Q8IZP0 508 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 SIX6OS1Q8N1H7 587 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 FAM172AQ8WUF8 416 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 C1orf54Q8WWF1 131 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ART4Q93070 314 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ARMC5Q96C12 935 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 PGAP3Q96FM1 320 aaPredicted RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 PIWIL1Q96J94 861 aaKnown RBP12.16□□□□□ -0.46
PRKCB-207ENST00000486868 FMO2Q99518 471 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 SMOQ99835 787 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 LPIN3Q9BQK8 851 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 ZNF670Q9BS34 389 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 TRIM51Q9BSJ1 452 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 COLEC11Q9BWP8 271 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 HEMGNQ9BXL5 484 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 GRHL1Q9NZI5 618 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 FRMPD3Q5JV73 1810 aa12.16□□□□□ -0.46
PRKCB-207ENST00000486868 SMAPO00193 183 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 LCP1P13796 627 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 IVDP26440 423 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 GJC1P36383 396 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 BRCC3P46736 316 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 RPL21P46778 160 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 HDAC4P56524 1084 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 DAOAP59103 153 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 KRT17Q04695 432 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 YWHAHQ04917 246 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ADIGQ0VDE8 80 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 CALCOCO2Q13137 446 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 MRPL58Q14197 206 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 SLMAPQ14BN4 828 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 PPP1R7Q15435 360 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ERMARDQ5T6L9 678 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 FBXO46Q6PJ61 603 aaPredicted RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ZDHHC24Q6UX98 284 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 GSPT2Q8IYD1 628 aaKnown RBP12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ALLCQ8N6M5 410 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 GOLGA6L1Q8N7Z2 621 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
PRKCB-207ENST00000486868 SNF8Q96H20 258 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms