RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SIK3Q9Y2K2 1263 aa13.9□□□□□ -0.18
SF1-216ENST00000486867 TRAV19A0A0A6YYK7 116 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 CHADO15335 359 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 USP17L7P0C7H9 530 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 PFKPQ01813 784 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 PDE4CQ08493 712 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 ZNF77Q15935 545 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 PIGZQ86VD9 579 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 FAM71AQ8IYT1 594 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 ST13P5Q8NFI4 369 aaPredicted RBP13.89□□□□□ -0.19
SF1-216ENST00000486867 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
SF1-216ENST00000486867 TRMT61BQ9BVS5 477 aaKnown RBP13.89□□□□□ -0.19
SF1-216ENST00000486867 VPS16Q9H269 839 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 GANQ9H2C0 597 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
SF1-216ENST00000486867 KRBA1A5PL33 1030 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 TULP2O00295 520 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 GABBR2O75899 941 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 TPM2P07951 284 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 ATP1A3P13637 1013 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 UCHL3P15374 230 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 CD19P15391 556 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 HDCP19113 662 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 BRD2P25440 801 aaKnown RBP13.88□□□□□ -0.19
SF1-216ENST00000486867 AVPR1AP37288 418 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 PGFP49763 221 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 KLHDC10Q6PID8 442 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
SF1-216ENST00000486867 ANKRD20A12PQ8NF67 263 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 BPIFB1Q8TDL5 484 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 IRF7Q92985 503 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 ZFRQ96KR1 1074 aaKnown RBP13.88□□□□□ -0.19
SF1-216ENST00000486867 FAM83CQ9BQN1 747 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
SF1-216ENST00000486867 GMIPQ9P107 970 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 HESX1Q9UBX0 185 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 CCL26Q9Y258 94 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
SF1-216ENST00000486867 SHISA7A6NL88 538 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 FOXN3O00409 490 aaPredicted RBP13.87□□□□□ -0.19
SF1-216ENST00000486867 GLULP15104 373 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CLCN1P35523 988 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 PSEN1P49768 467 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 SLC8A3P57103 927 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 STARD6P59095 220 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 ZXDBP98169 803 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 PLCB2Q00722 1185 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 PRKCQQ04759 706 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 GRM2Q14416 872 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 FBXL6Q8N531 539 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 HSFY1Q96LI6 401 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 OSER1Q9NX31 292 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CLIC5Q9NZA1 410 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CHORDC1Q9UHD1 332 aaPredicted RBP13.87□□□□□ -0.19
SF1-216ENST00000486867 PCDHGC3Q9UN70 934 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CACNA1IQ9P0X4 2223 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 CACNA1HO95180 2353 aa13.87□□□□□ -0.19
SF1-216ENST00000486867 FANCMQ8IYD8 2048 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 DPYSL4O14531 572 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 CYP26A1O43174 497 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 COCHO43405 550 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 MED7O43513 233 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 CALCAP01258 141 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 CKMP06732 381 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 CFHP08603 1231 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 KRT5P13647 590 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 GNA15P30679 374 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 GDI1P31150 447 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 GPD2P43304 727 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 JAM2P57087 298 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
SF1-216ENST00000486867 ARHGAP44Q17R89 818 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 IER5LQ5T953 404 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 LSM14BQ9BX40 385 aaKnown RBP13.86□□□□□ -0.19
SF1-216ENST00000486867 STK33Q9BYT3 514 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 SMG9Q9H0W8 520 aaKnown RBP13.86□□□□□ -0.19
SF1-216ENST00000486867 BRD9Q9H8M2 597 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 NMUR1Q9HB89 426 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms