RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 LARP4BQ92615 738 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 HPS3Q969F9 1004 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 LENG9Q96B70 501 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 TBC1D20Q96BZ9 403 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CLIP3Q96DZ5 547 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 SLC39A13Q96H72 371 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 ERO1AQ96HE7 468 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CLPTM1LQ96KA5 538 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 SNX27Q96L92 541 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 ZMAT2Q96NC0 199 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 RTFDC1Q9BY42 306 aaPredicted RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 CLK4Q9HAZ1 481 aaKnown RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 AASDHPPTQ9NRN7 309 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 KLHL11Q9NVR0 708 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CFDP1Q9UEE9 299 aaPredicted RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 CCPG1Q9ULG6 757 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 CORO1CQ9ULV4 474 aaPredicted RBP5.9□□□□□ -1.46
COPS3-209ENST00000486810 ZNF148Q9UQR1 794 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.9□□□□□ -1.46
COPS3-209ENST00000486810 HS3ST4Q9Y661 456 aa5.9□□□□□ -1.46
COPS3-209ENST00000486810 GAKO14976 1311 aa5.9□□□□□ -1.47
COPS3-209ENST00000486810 ATXN2Q99700 1313 aaKnown RBP5.9□□□□□ -1.47
COPS3-209ENST00000486810 MYOM3Q5VTT5 1437 aa5.9□□□□□ -1.47
COPS3-209ENST00000486810 CCDC162PA2VCL2 907 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 LRRC14BA6NHZ5 514 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 MARCH11A6NNE9 402 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 DIRC3C9JPN6 131 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 TEX33O43247 280 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 LPXNO60711 386 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 RECQL4O94761 1208 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 ITGB1P05556 798 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 POU2F2P09086 479 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 PNMA6AP0CW24 399 aaPredicted RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 HSPA8P11142 646 aaKnown RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 SFTPCP11686 197 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 UBASH3AP57075 661 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 DMPKQ09013 629 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 IKQ13123 557 aaPredicted RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 STIM1Q13586 685 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 SMC1AQ14683 1233 aaKnown RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 KCNB1Q14721 858 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 BEAN1Q3B7T3 259 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 FAM133BQ5BKY9 247 aaKnown RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 NANOGNBQ7Z5D8 188 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 HOOK3Q86VS8 718 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 RAB11FIP4Q86YS3 637 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 TNIP2Q8NFZ5 429 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 LILRB1Q8NHL6 650 aaPredicted RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 CTNNBL1Q8WYA6 563 aaPredicted RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 SPDL1Q96EA4 605 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 HSPBAP1Q96EW2 488 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 CFAP36Q96G28 342 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 CTAGE1Q96RT6 745 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 ADAM2Q99965 735 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 RHOBTB2Q9BYZ6 727 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 C11orf54Q9H0W9 315 aaPredicted RBP5.89□□□□□ -1.47
COPS3-209ENST00000486810 PCED1AQ9H1Q7 454 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 GSTO2Q9H4Y5 243 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 ZWILCHQ9H900 591 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 AKIP1Q9NQ31 210 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 DDX21Q9NR30 783 aaKnown RBP eCLIP5.89□□□□□ -1.47
COPS3-209ENST00000486810 HELLSQ9NRZ9 838 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 STAP2Q9UGK3 403 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 CIDEBQ9UHD4 219 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 FZD1Q9UP38 647 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 TRAF3IP3Q9Y228 551 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 TIMM22Q9Y584 194 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 PCDHB2Q9Y5E7 798 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 EID1Q9Y6B2 187 aa5.89□□□□□ -1.47
COPS3-209ENST00000486810 CENPVL1A0A0U1RR11 272 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 TMEM200CA6NKL6 621 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 H0YC42 278 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 NDUFAB1O14561 156 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 AKAP10O43572 662 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 TSPAN1O60635 241 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 ZNF254O75437 659 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 STAMBPO95630 424 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 PARP1P09874 1014 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 CCDC166P0CW27 439 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 KRT4P19013 534 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 GCSHP23434 173 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 ATP5DP30049 168 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 PMS2P54278 862 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 TPD52P55327 224 aaPredicted RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 RRP1P56182 461 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 BASP1P80723 227 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 MRPL28Q13084 256 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 LRRC41Q15345 812 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 PTPN14Q15678 1187 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 PROSER3Q2NL68 480 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 PABPC1LQ4VXU2 614 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 KIAA1614Q5VZ46 1190 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 UNC5DQ6UXZ4 953 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 NCCRP1Q6ZVX7 275 aaPredicted RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 DGLUCYQ7Z3D6 616 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms