RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CYP2F1P24903 491 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PLA2G4AP47712 749 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 RGS7P49802 495 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ERVFC1P60507 584 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 FMO1Q01740 532 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CENPCQ03188 943 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 DUSP4Q13115 394 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PDCLQ13371 301 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PABPC1LQ4VXU2 614 aaKnown RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 ODF2Q5BJF6 829 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 EFHC1Q5JVL4 640 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 HGSNATQ68CP4 663 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 OR6B2Q6IFH4 312 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 DENND1BQ6P3S1 775 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 DNAJC24Q6P3W2 148 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 WDR59Q6PJI9 974 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 EP400NLQ6ZTU2 488 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 DENND5BQ6ZUT9 1274 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 RBM23Q86U06 439 aaKnown RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 RHOT2Q8IXI1 618 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 FUKQ8N0W3 1084 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 NUP93Q8N1F7 819 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ATAD1Q8NBU5 361 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 STKLD1Q8NE28 680 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PDZD8Q8NEN9 1154 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 SLC30A5Q8TAD4 765 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 GDPD5Q8WTR4 605 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 TFAP2BQ92481 460 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 EDAQ92838 391 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CASP10Q92851 521 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 MRPL38Q96DV4 380 aaKnown RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 ZNF830Q96NB3 372 aaPredicted RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ALS2CR12Q96Q35 445 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 TMEM209Q96SK2 561 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CLSTN3Q9BQT9 956 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 NACA2Q9H009 215 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 NSUN3Q9H649 340 aaKnown RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 IGFLR1Q9H665 355 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PIDD1Q9HB75 910 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ACP6Q9NPH0 428 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 COMMD8Q9NX08 183 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 LMCD1Q9NZU5 365 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 MYO1AQ9UBC5 1043 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 MUTYHQ9UIF7 546 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 INTUQ9ULD6 942 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 MAGED2Q9UNF1 606 aaPredicted RBP7.32□□□□□ -1.24
UBR4-214ENST00000486515 SLC27A5Q9Y2P5 690 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 ASB3Q9Y575 518 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 PCDHA13Q9Y5I0 950 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 SPTBN2O15020 2390 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 CITO14578 2027 aa7.32□□□□□ -1.24
UBR4-214ENST00000486515 WDR27A2RRH5 827 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 GOLGA8SH3BPF8 625 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 DDX3XO00571 662 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR4-214ENST00000486515 TGM5O43548 720 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 HCRTO43612 131 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 ABCB7O75027 752 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 ABL1P00519 1130 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CYP1A1P04798 512 aaPredicted RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 TMEM253P0C7T8 217 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 RALAP11233 206 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 KRT3P12035 628 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 UNGP13051 313 aaPredicted RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 GPD2P43304 727 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 PPP3CCP48454 512 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 NRIP1P48552 1158 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 PSEN1P49768 467 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 TKTL1P51854 596 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CDR1P51861 262 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 VAV2P52735 878 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SLC5A3P53794 718 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 VCPP55072 806 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 NOMO3P69849 1222 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 ZP2Q05996 745 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 ZNF268Q14587 947 aaPredicted RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 DDR2Q16832 855 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 FAM102AQ5T9C2 384 aaPredicted RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 CYP4A22Q5TCH4 519 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 BTBD8Q5XKL5 378 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 LLGL2Q6P1M3 1020 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 MMS22LQ6ZRQ5 1243 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 TRIM67Q6ZTA4 783 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CLEC20AQ6ZU45 233 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SND1Q7KZF4 910 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR4-214ENST00000486515 RSRC2Q7L4I2 434 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 PIGZQ86VD9 579 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 LRRTM3Q86VH5 581 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 TTC30AQ86WT1 665 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 PHF13Q86YI8 300 aaPredicted RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 TCEAL8Q8IYN2 117 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 MCOLN2Q8IZK6 566 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SYCE1Q8N0S2 351 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 RNF139Q8WU17 664 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 HDAC7Q8WUI4 952 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SLC35F5Q8WV83 523 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms