RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TBC1D25Q3MII6 688 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 COBLL1Q53SF7 1204 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 RNASE12Q5GAN4 147 aaKnown RBP6.37□□□□□ -1.39
LTN1-206ENST00000486427 PTF1AQ7RTS3 328 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 DDB2Q92466 427 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 TBC1D23Q9NUY8 699 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 LPAR3Q9UBY5 353 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 ZNF212Q9UDV6 495 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
LTN1-206ENST00000486427 TISP43B9A030 160 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 KIF3BO15066 747 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 KPNA5O15131 536 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 IL18RAPO95256 599 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 A1BGP04217 495 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 NTSR1P30989 418 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 HOXA4Q00056 320 aaPredicted RBP6.36□□□□□ -1.39
LTN1-206ENST00000486427 ZNF543Q08ER8 600 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 FOXF2Q12947 444 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 DAG1Q14118 895 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 KLHDC7AQ5VTJ3 777 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 KIRREL2Q6UWL6 708 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 TRIM72Q6ZMU5 477 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 SRRM1Q8IYB3 904 aaKnown RBP6.36□□□□□ -1.39
LTN1-206ENST00000486427 CTHRC1Q96CG8 243 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 WDYHV1Q96HA8 205 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 PCSK5Q92824 1860 aa6.36□□□□□ -1.39
LTN1-206ENST00000486427 SPRY2O43597 315 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 EXOC3O60645 756 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 ANXA2P07355 339 aaKnown RBP6.35□□□□□ -1.39
LTN1-206ENST00000486427 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
LTN1-206ENST00000486427 PGDP52209 483 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 PRAMEF17Q5VTA0 474 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 RRAGBQ5VZM2 374 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 MTHFD1LQ6UB35 978 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 ZNF66Q6ZN08 573 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 LIX1LQ8IVB5 337 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 METTL25Q8N6Q8 603 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 SIRT6Q8N6T7 355 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 TERB1Q8NA31 727 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 INO80BQ9C086 356 aaPredicted RBP6.35□□□□□ -1.39
LTN1-206ENST00000486427 CIPCQ9C0C6 399 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 AMFRQ9UKV5 643 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
LTN1-206ENST00000486427 AQP7P3A6NL99 342 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 PSMD9O00233 223 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 CES2O00748 559 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 PMM2O15305 246 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 FGAP02671 866 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 TRIM27P14373 513 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 GNALP38405 381 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 PRIM2P49643 509 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 GATMP50440 423 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 CASP5P51878 434 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 SRSF4Q08170 494 aaKnown RBP6.34□□□□□ -1.39
LTN1-206ENST00000486427 SAFBQ15424 915 aaKnown RBP eCLIP6.34□□□□□ -1.39
LTN1-206ENST00000486427 MANEALQ5VSG8 457 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 RNF44Q7L0R7 432 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 CHSY1Q86X52 802 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 RNF152Q8N8N0 203 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
LTN1-206ENST00000486427 IPCEF1Q8WWN9 437 aaPredicted RBP6.34□□□□□ -1.39
LTN1-206ENST00000486427 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
LTN1-206ENST00000486427 TBCBQ99426 244 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 FAM83DQ9H4H8 585 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 VPS51Q9UID3 782 aa6.34□□□□□ -1.39
LTN1-206ENST00000486427 A0A087WZ62 844 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 POM121BA6NF01 834 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 FOXN3O00409 490 aaPredicted RBP6.33□□□□□ -1.4
LTN1-206ENST00000486427 EXOC5O00471 708 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 INMTO95050 263 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 LATS1O95835 1130 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 TSHRP16473 764 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 MTHFSP49914 203 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 RENBPP51606 427 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 ALDH5A1P51649 535 aaPredicted RBP6.33□□□□□ -1.4
LTN1-206ENST00000486427 USP49Q70CQ1 688 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 SDR16C5Q8N3Y7 309 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 C11orf44Q8N8P7 122 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 IQCDQ96DY2 449 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 RITA1Q96K30 269 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 SNX18Q96RF0 628 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 MMS19Q96T76 1030 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 NAA15Q9BXJ9 866 aaKnown RBP6.33□□□□□ -1.4
LTN1-206ENST00000486427 GJB4Q9NTQ9 266 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 ASIC5Q9NY37 505 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 HPSEQ9Y251 543 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 KAT6AQ92794 2004 aa6.33□□□□□ -1.4
LTN1-206ENST00000486427 PRRT4C9JH25 899 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 H7C1Q1 480 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 CELA2AP08217 269 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 MYCLP12524 364 aaPredicted RBP6.32□□□□□ -1.4
LTN1-206ENST00000486427 DIO1P49895 249 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 SUMO2P61956 95 aaKnown RBP6.32□□□□□ -1.4
LTN1-206ENST00000486427 TUBA4AP68366 448 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 LMAN2Q12907 356 aa6.32□□□□□ -1.4
LTN1-206ENST00000486427 SLC10A2Q12908 348 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms