RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CCDC175P0C221 793 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 TNNT1P13805 278 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 CASP14P31944 242 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 KRT9P35527 623 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 CXCL12P48061 93 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 TUFMP49411 452 aaKnown RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 ADKP55263 362 aaKnown RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 CCDC6Q16204 474 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 SV2CQ496J9 727 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 FSTL4Q6MZW2 842 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 CBWD2Q8IUF1 395 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 SLC9A9Q8IVB4 645 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 TRIM59Q8IWR1 403 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 CMTM8Q8IZV2 173 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 THEM5Q8N1Q8 247 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 C17orf53Q8N3J3 647 aaPredicted RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 TTC16Q8NEE8 873 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 PPP1R13BQ96KQ4 1090 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 FAM83CQ9BQN1 747 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 RBAKQ9NYW8 714 aaPredicted RBP10□□□□□ -0.81
TMEM39A-208ENST00000486159 DSEQ9UL01 958 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 USP18Q9UMW8 372 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 PCDHB5Q9Y5E4 795 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 SNX9Q9Y5X1 595 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 F5P12259 2224 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 OTOGLQ3ZCN5 2332 aa10□□□□□ -0.81
TMEM39A-208ENST00000486159 EP300Q09472 2414 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 GDF9O60383 454 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 IL18RAPO95256 599 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 EGFP01133 1207 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 NR2F2P24468 414 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 HNRNPH3P31942 346 aaKnown RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ZXDBP98169 803 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 CCINQ13939 588 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 PUM1Q14671 1186 aaKnown RBP eCLIP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 VEPH1Q14D04 833 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 SYCP1Q15431 976 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 TAF12Q16514 161 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 SOWAHAQ2M3V2 549 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ARHGAP29Q52LW3 1261 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ARHGAP15Q53QZ3 475 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 CEP135Q66GS9 1140 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ITIH5Q86UX2 942 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 NELFCDQ8IXH7 590 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 C12orf56Q8IXR9 622 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 SYCP3Q8IZU3 236 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 RDH13Q8NBN7 331 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 KIF18AQ8NI77 898 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 SPPL2BQ8TCT7 592 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 EZH1Q92800 747 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 TTYH3Q9C0H2 523 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 C8orf33Q9H7E9 229 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ARMCX3Q9UH62 379 aaPredicted RBP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 EXOC7Q9UPT5 735 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 SIK3Q9Y2K2 1263 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 PPP2R2CQ9Y2T4 447 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 FAM208BQ5VWN6 2430 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 ANAPC1Q9H1A4 1944 aa9.99□□□□□ -0.81
TMEM39A-208ENST00000486159 GVINP1Q7Z2Y8 2422 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 FLNBO75369 2602 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 GREB1Q4ZG55 1949 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 EML5Q05BV3 1969 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 GTPBP10A4D1E9 387 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 C2orf78A6NCI8 922 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SCAMP3O14828 347 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CLIC2O15247 247 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 MAPK13O15264 365 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CST3P01034 146 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 NR3C1P04150 777 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 PDGFRBP09619 1106 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 GARTP22102 1010 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CDC25CP30307 473 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 PSMC2P35998 433 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 GALK1P51570 392 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CCR3P51677 355 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CACNA2D1P54289 1103 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 USP46P62068 366 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 RUNX3Q13761 415 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SIM2Q14190 667 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 MEA1Q16626 185 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 ITPRIPL2Q3MIP1 535 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF662Q6ZS27 426 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 FMNL3Q8IVF7 1028 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CCDC170Q8IYT3 715 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 TXLNBQ8N3L3 684 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SPEM1Q8N4L4 309 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms