RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RAD9AQ99638 391 aa15.13■□□□□ 0.01
COL9A1-207ENST00000486080 CLSTN3Q9BQT9 956 aa15.13■□□□□ 0.01
COL9A1-207ENST00000486080 CNPY3Q9BT09 278 aa15.13■□□□□ 0.01
COL9A1-207ENST00000486080 CARD9Q9H257 536 aa15.13■□□□□ 0.01
COL9A1-207ENST00000486080 CRISPLD1Q9H336 500 aa15.13■□□□□ 0.01
COL9A1-207ENST00000486080 MTMR11A4FU01 709 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 YJEFN3A6XGL0 299 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 E7ENQ6 273 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 TLL1O43897 1013 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 TADA3O75528 432 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 ZBED1O96006 694 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 OR1D2P34982 312 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 GLUD2P49448 558 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 RWDD2BP57060 319 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 DAOAP59103 153 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 ATP11AP98196 1134 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 DSG1Q02413 1049 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 CKAP4Q07065 602 aaKnown RBP15.12■□□□□ 0.01
COL9A1-207ENST00000486080 CDO1Q16878 200 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 RHOT1Q8IXI2 618 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 AUTS2Q8WXX7 1259 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 TSC1Q92574 1164 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 FAM149B1Q96BN6 582 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 ADAM33Q9BZ11 813 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 PCDHB12Q9Y5F1 795 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 BACE2Q9Y5Z0 518 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 MYO16Q9Y6X6 1858 aa15.12■□□□□ 0.01
COL9A1-207ENST00000486080 WDR27A2RRH5 827 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CTAGE15A4D2H0 777 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 DPYSL4O14531 572 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 PSTPIP1O43586 416 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 FBXO21O94952 628 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CTAGE8P0CG41 777 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 IL1R2P27930 398 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 YWHAZP63104 245 aaKnown RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 ROR1Q01973 937 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 C9orf50Q5SZB4 431 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 BHLHA9Q7RTU4 235 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CTAGE6Q86UF2 777 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CTAGE4Q8IX94 777 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 RASGEF1CQ8N431 466 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 PHOSPHO2Q8TCD6 241 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CLP1Q92989 425 aaKnown RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 ACSF2Q96CM8 615 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 OXCT2Q9BYC2 517 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 PNPLA8Q9NP80 782 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 AAASQ9NRG9 546 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 KLHL11Q9NVR0 708 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 PCSK1NQ9UHG2 260 aa15.11■□□□□ 0.01
COL9A1-207ENST00000486080 ZNF638Q14966 1978 aaKnown RBP15.11■□□□□ 0.01
COL9A1-207ENST00000486080 UQCRHLA0A096LP55 91 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 HSF2BPO75031 334 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 FGF18O76093 207 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 UQCRHP07919 91 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DNAJB2P25686 324 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 MIPP30301 263 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SDC4P31431 198 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PPM1AP35813 382 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PAFAH1B1P43034 410 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 MAGEA11P43364 429 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SLC5A3P53794 718 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SLC25A11Q02978 314 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 IFRD2Q12894 506 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DUSP4Q13115 394 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 RASIP1Q5U651 963 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 VSTM1Q6UX27 236 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 NOA1Q8NC60 698 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 ACTRT1Q8TDG2 376 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 UBE2Q2Q8WVN8 375 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 ZWILCHQ9H900 591 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 RNF14Q9UBS8 474 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 USP3Q9Y6I4 520 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 GREB1Q4ZG55 1949 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 GBF1Q92538 1859 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PGRMC1O00264 195 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 CTIFO43310 598 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DAB1O75553 588 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 RNF8O76064 485 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 FGGP02679 453 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 FYNP06241 537 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 C2orf54Q08AI8 447 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 DCAF6Q58WW2 860 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SYPL2Q5VXT5 272 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PM20D1Q6GTS8 502 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 ARCQ7LC44 396 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms