RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ASIC2Q16515 512 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GOLGA7BQ2TAP0 167 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 LIN9Q5TKA1 542 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SFMBT2Q5VUG0 894 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SDHAF4Q5VUM1 108 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SPECC1LQ69YQ0 1117 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PDE12Q6L8Q7 609 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 DPY19L2P1Q6NXN4 242 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ENOSF1Q7L5Y1 443 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 UNC93AQ86WB7 457 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 VSTM4Q8IW00 320 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 TTC9BQ8N6N2 239 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SLC4A11Q8NBS3 891 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 B3GALNT2Q8NCR0 500 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 STKLD1Q8NE28 680 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ZNF397Q8NF99 534 aaPredicted RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 VN1R2Q8NFZ6 395 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 UBA3Q8TBC4 463 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 SLC2A14Q8TDB8 520 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GPR152Q8TDT2 470 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GIPC2Q8TF65 315 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ANP32BQ92688 251 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 MRPL38Q96DV4 380 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 CYFIP2Q96F07 1278 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ABHD17AQ96GS6 310 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PCED1BQ96HM7 432 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 FAM81BQ96LP2 452 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 NECAB3Q96P71 396 aaPredicted RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 ACBD6Q9BR61 282 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 GPR88Q9GZN0 384 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 DNAI2Q9GZS0 605 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 ZCWPW1Q9H0M4 648 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 NSUN3Q9H649 340 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 CRTAC1Q9NQ79 661 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 CEP72Q9P209 647 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 LUC7L2Q9Y383 392 aaKnown RBP5.97□□□□□ -1.45
COPS3-208ENST00000486032 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 PCDHB5Q9Y5E4 795 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 BACE2Q9Y5Z0 518 aa5.97□□□□□ -1.45
COPS3-208ENST00000486032 FSD2A1L4K1 749 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 GOLGA6L6A8MZA4 724 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 AKR1B15C9JRZ8 316 aaPredicted RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 M0QYV0 167 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TBC1D4O60343 1298 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 LILRB3O75022 631 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 AP1G2O75843 785 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SEC24AO95486 1093 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 GYPCP04921 128 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 FAM163BP0C2L3 166 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 VDRP11473 427 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TNFAIP3P21580 790 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 RFX1P22670 979 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 CYP2F1P24903 491 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ANXA13P27216 316 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 GRIK1P39086 918 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 PDE6CP51160 858 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 IRAK1P51617 712 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 KCNQ1P51787 676 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MAP3K7CLP57077 242 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ZBED6P86452 979 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 KLHL30Q0D2K2 578 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TWF1Q12792 350 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 HYAL1Q12794 435 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 GPR17Q13304 367 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 RAB33AQ14088 237 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TRIM14Q14142 442 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MAPRE1Q15691 268 aaKnown RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 CLUL1Q15846 466 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TAF12Q16514 161 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 DUSP6Q16828 381 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 DDR2Q16832 855 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SGO2Q562F6 1265 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TDRD12Q587J7 1177 aaKnown RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 PPM1LQ5SGD2 360 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SLC8B1Q6J4K2 584 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 C4orf50Q6ZRC1 276 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 LIMS2Q7Z4I7 341 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 FAM35AQ86V20 835 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SLC47A2Q86VL8 602 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 PASD1Q8IV76 773 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TTC39CQ8N584 583 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 UBR7Q8N806 425 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 C12orf76Q8N812 135 aaPredicted RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 KREMEN2Q8NCW0 462 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ZNF461Q8TAF7 563 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SLC7A14Q8TBB6 771 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SLC22A17Q8WUG5 538 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SLC20A1Q8WUM9 679 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 TFAP2BQ92481 460 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 SHC3Q92529 594 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 FAXDC2Q96IV6 333 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.96□□□□□ -1.46
COPS3-208ENST00000486032 NAA15Q9BXJ9 866 aaKnown RBP5.96□□□□□ -1.46
COPS3-208ENST00000486032 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 ZNF518BQ9C0D4 1074 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 CRISPLD1Q9H336 500 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
COPS3-208ENST00000486032 MAN1C1Q9NR34 630 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms