RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TRIM49D1C9J1S8 452 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 ICAM3P32942 547 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 RAP1GAPP47736 663 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 EFNA5P52803 228 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 MXRA7P84157 204 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 ZC3H18Q86VM9 953 aaKnown RBP23.45■■□□□ 1.34
CLN5-202ENST00000485938 KCNK4Q9NYG8 393 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 NXF1Q9UBU9 619 aaKnown RBP23.45■■□□□ 1.34
CLN5-202ENST00000485938 LCTP09848 1927 aa23.45■■□□□ 1.34
CLN5-202ENST00000485938 KIF3CO14782 793 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 CHADO15335 359 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 PGM1P36871 562 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 SATB1Q01826 763 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 MMRN1Q13201 1228 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 SURF1Q15526 300 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 HSF5Q4G112 596 aaPredicted RBP23.44■■□□□ 1.34
CLN5-202ENST00000485938 SMYD5Q6GMV2 418 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 NIM1KQ8IY84 436 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 STMN2Q93045 179 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 PEBP4Q96S96 227 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 LBHD1Q9BQE6 289 aaPredicted RBP23.44■■□□□ 1.34
CLN5-202ENST00000485938 SPATS2LQ9NUQ6 558 aaKnown RBP23.44■■□□□ 1.34
CLN5-202ENST00000485938 CAPN14A8MX76 684 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 CLGNO14967 610 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 RNF8O76064 485 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 SKIP12755 728 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 SP100P23497 879 aaPredicted RBP23.44■■□□□ 1.34
CLN5-202ENST00000485938 RAP1GDS1P52306 607 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 FSTL1Q12841 308 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 WDR78Q5VTH9 848 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 DTX3LQ8TDB6 740 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 CFAP36Q96G28 342 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 TEX13BQ9BXU2 312 aa23.44■■□□□ 1.34
CLN5-202ENST00000485938 IQCGQ9H095 443 aaKnown RBP23.44■■□□□ 1.34
CLN5-202ENST00000485938 EME2A4GXA9 379 aaPredicted RBP23.43■■□□□ 1.34
CLN5-202ENST00000485938 ENDOD1O94919 500 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 YWHAZP63104 245 aaKnown RBP23.43■■□□□ 1.34
CLN5-202ENST00000485938 AP1B1Q10567 949 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 TNFAIP1Q13829 316 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 ACAP1Q15027 740 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 STXBP2Q15833 593 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 PPM1NQ8N819 430 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 PDCD7Q8N8D1 485 aaKnown RBP23.43■■□□□ 1.34
CLN5-202ENST00000485938 FAF2Q96CS3 445 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 C7orf26Q96N11 449 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 PLLPQ9Y342 182 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 A8MXQ7 604 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 MAFO75444 373 aaPredicted RBP23.43■■□□□ 1.34
CLN5-202ENST00000485938 EGFRP00533 1210 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 RCN2Q14257 317 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 ARHGAP24Q8N264 748 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 MCRS1Q96EZ8 462 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 MECRQ9BV79 373 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 NRBP2Q9NSY0 501 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 PPME1Q9Y570 386 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 ASB3Q9Y575 518 aa23.43■■□□□ 1.34
CLN5-202ENST00000485938 CXorf49A8MYA2 514 aaPredicted RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 MAP3K13O43283 966 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 FESP07332 822 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 SNRPAP09012 282 aaKnown RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 ORC1Q13415 861 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 THOC5Q13769 683 aaKnown RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 FAM182AQ5T1J6 154 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 ANGEL2Q5VTE6 544 aaKnown RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 CES4AQ5XG92 561 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 TREML1Q86YW5 311 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 CTAGE3PQ8IX95 158 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 SLC4A11Q8NBS3 891 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 USP29Q9HBJ7 922 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 DLGAP2Q9P1A6 1054 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 ZNF212Q9UDV6 495 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 ZNF180Q9UJW8 692 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 B2RBV5 119 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 I3L4J1 428 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 MAGEC1O60732 1142 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 KRT37O76014 449 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 TNNC2P02585 160 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 CPA2P48052 419 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 MRPS5P82675 430 aaKnown RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 BST1Q10588 318 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 CYP4V2Q6ZWL3 525 aaPredicted RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 ZNF280CQ8ND82 737 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 SPDYE1Q8NFV5 336 aaPredicted RBP23.42■■□□□ 1.34
CLN5-202ENST00000485938 PLAC1Q9HBJ0 212 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 POPDC2Q9HBU9 364 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 RAB6BQ9NRW1 208 aa23.42■■□□□ 1.34
CLN5-202ENST00000485938 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.42■■□□□ 1.34
CLN5-202ENST00000485938 PRKCBP05771 671 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 AMPD1P23109 780 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 HMGCS2P54868 508 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 CDH6P55285 790 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 CDH8P55286 799 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 OR52E8Q6IFG1 317 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 TMPRSS6Q8IU80 811 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 TRIM42Q8IWZ5 723 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 FBXO27Q8NI29 283 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 CCDC110Q8TBZ0 833 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 BCO2Q9BYV7 579 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 VCXQ9H320 206 aa23.41■■□□□ 1.34
CLN5-202ENST00000485938 DOCK1Q14185 1865 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms