RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 AFPP02771 609 aaKnown RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 MBL2P11226 248 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 MAGEA9P43362 315 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 RPS9P46781 194 aaKnown RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 IFNAR2P48551 515 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 SLC7A9P82251 487 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 ZXDBP98169 803 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 PON2Q15165 354 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 PDGFRLQ15198 375 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 C1orf228Q6PIY5 440 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 PPM1KQ8N3J5 372 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 OSCP1Q8WVF1 389 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 CNOT6LQ96LI5 555 aaKnown RBP19.46■□□□□ 0.71
COL1A1-206ENST00000485870 DUSP16Q9BY84 665 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 LMAN1LQ9HAT1 526 aa19.46■□□□□ 0.71
COL1A1-206ENST00000485870 FAM92AA1XBS5 289 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 COCHO43405 550 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 TCF3P15923 654 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 ACO1P21399 889 aaKnown RBP19.45■□□□□ 0.7
COL1A1-206ENST00000485870 PGFP49763 221 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 DPCR1Q3MIW9 517 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 HECTD3Q5T447 861 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 ALYREFQ86V81 257 aaKnown RBP19.45■□□□□ 0.7
COL1A1-206ENST00000485870 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 KAT5Q92993 513 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 CCSER2Q9H7U1 834 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 PNPLA8Q9NP80 782 aa19.45■□□□□ 0.7
COL1A1-206ENST00000485870 MYO15AQ9UKN7 3530 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 SCAMP3O14828 347 aaKnown RBP19.44■□□□□ 0.7
COL1A1-206ENST00000485870 CYP26A1O43174 497 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 LAMTOR5O43504 91 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 ZDHHC11BP0C7U3 371 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 CD19P15391 556 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 TPD52L1Q16890 204 aaPredicted RBP19.44■□□□□ 0.7
COL1A1-206ENST00000485870 GOLGA7BQ2TAP0 167 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 SNX30Q5VWJ9 437 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 ARHGAP17Q68EM7 881 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 ARHGEF19Q8IW93 802 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 CPA6Q8N4T0 437 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 UBR7Q8N806 425 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 ATP2A3Q93084 1043 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 INTS2Q9H0H0 1204 aaKnown RBP19.44■□□□□ 0.7
COL1A1-206ENST00000485870 TLR8Q9NR97 1041 aaKnown RBP19.44■□□□□ 0.7
COL1A1-206ENST00000485870 RBM12Q9NTZ6 932 aaKnown RBP19.44■□□□□ 0.7
COL1A1-206ENST00000485870 CFAP97Q9P2B7 532 aa19.44■□□□□ 0.7
COL1A1-206ENST00000485870 CHRNB1P11230 501 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 MRE11P49959 708 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 MTAPQ13126 283 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 EML3Q32P44 896 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 SGO2Q562F6 1265 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 TMEM270Q6UE05 265 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 RRAGAQ7L523 313 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 MAML2Q8IZL2 1156 aaPredicted RBP19.43■□□□□ 0.7
COL1A1-206ENST00000485870 EHBP1Q8NDI1 1231 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 GPT2Q8TD30 523 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 NACA2Q9H009 215 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 LINC00597Q9H2U6 94 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 CHRDQ9H2X0 955 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 ECT2Q9H8V3 914 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 SCML2Q9UQR0 700 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 PCDHB4Q9Y5E5 795 aa19.43■□□□□ 0.7
COL1A1-206ENST00000485870 VPS13AQ96RL7 3174 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 GOLGA6L22H0YM25 854 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 TLR5O60602 858 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 SP9P0CG40 484 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-206ENST00000485870 TUBP50607 506 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 KIF11P52732 1056 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 LRRC32Q14392 662 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 TTC30AQ86WT1 665 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 DDX42Q86XP3 938 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL1A1-206ENST00000485870 ANKRD52Q8NB46 1076 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 CHFRQ96EP1 664 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 DACH1Q9UI36 760 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 TSPAN16Q9UKR8 245 aa19.42■□□□□ 0.7
COL1A1-206ENST00000485870 DMDP11532 3685 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 VDRP11473 427 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 GJA4P35212 333 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 NBL1P41271 181 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 MTIF2P46199 727 aaKnown RBP19.41■□□□□ 0.7
COL1A1-206ENST00000485870 SLC8A3P57103 927 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 CSTF1Q05048 431 aaKnown RBP19.41■□□□□ 0.7
COL1A1-206ENST00000485870 NAIF1Q69YI7 327 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-206ENST00000485870 Q6ZS52 159 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 PIGZQ86VD9 579 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 IRF2BP1Q8IU81 584 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 ZFRQ96KR1 1074 aaKnown RBP19.41■□□□□ 0.7
COL1A1-206ENST00000485870 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 NMUR1Q9HB89 426 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 OSER1Q9NX31 292 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 HESX1Q9UBX0 185 aa19.41■□□□□ 0.7
COL1A1-206ENST00000485870 ZFHX2Q9C0A1 2572 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-206ENST00000485870 TULP2O00295 520 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 NFATC1O95644 943 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 TBX18O95935 607 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 IRF1P10914 325 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 BCAT1P54687 386 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 AMPD2Q01433 879 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms