RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 HECTD3Q5T447 861 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 SV2AQ7L0J3 742 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 ACOT1Q86TX2 421 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 USP33Q8TEY7 942 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 TAF4BQ92750 862 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
SMC4-216ENST00000485645 ZC3H10Q96K80 434 aaKnown RBP18.19■□□□□ 0.5
SMC4-216ENST00000485645 COMMD8Q9NX08 183 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 TBC1D14Q9P2M4 693 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 EBF1Q9UH73 591 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 MYO16Q9Y6X6 1858 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 EML5Q05BV3 1969 aa18.19■□□□□ 0.5
SMC4-216ENST00000485645 K7EQS6 105 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 TNFRSF10BO14763 440 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 SCAMP3O14828 347 aaKnown RBP18.18■□□□□ 0.5
SMC4-216ENST00000485645 COCHO43405 550 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 ZNF806P0C7X5 589 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 DGKEP52429 567 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 AASDHQ4L235 1098 aaPredicted RBP18.18■□□□□ 0.5
SMC4-216ENST00000485645 C2orf27AQ580R0 203 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 SNX30Q5VWJ9 437 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 FUKQ8N0W3 1084 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 C12orf50Q8NA57 414 aaPredicted RBP18.18■□□□□ 0.5
SMC4-216ENST00000485645 TSTD1Q8NFU3 115 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 SCAMP5Q8TAC9 235 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 KRT82Q9NSB4 513 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 TRAF3IP3Q9Y228 551 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 PCDHGA5Q9Y5G8 931 aa18.18■□□□□ 0.5
SMC4-216ENST00000485645 KIAA1549LQ6ZVL6 1849 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 E2F8A0AVK6 867 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 ADH1CP00326 375 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 ASS1P00966 412 aaKnown RBP18.17■□□□□ 0.5
SMC4-216ENST00000485645 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
SMC4-216ENST00000485645 EIF2DP41214 584 aaKnown RBP18.17■□□□□ 0.5
SMC4-216ENST00000485645 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 NDST1P52848 882 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 SF3A2Q15428 464 aaKnown RBP18.17■□□□□ 0.5
SMC4-216ENST00000485645 ELF2Q15723 593 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 CCDC6Q16204 474 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 PLK5Q496M5 336 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 RHBDF2Q6PJF5 856 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 UNC93AQ86WB7 457 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 PNKPQ96T60 521 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 SH3BP1Q9Y3L3 701 aa18.17■□□□□ 0.5
SMC4-216ENST00000485645 MYOFQ9NZM1 2061 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 FAM92AA1XBS5 289 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 MAPK13O15264 365 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 HLA-DRAP01903 254 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 PRR29P0C7W0 189 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 ADH5P11766 374 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 CCDC130P13994 396 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 SLC6A11P48066 632 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 TUBP50607 506 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 VAMP7P51809 220 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 NDUFA8P51970 172 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 MRPS21P82921 87 aaKnown RBP18.16■□□□□ 0.5
SMC4-216ENST00000485645 ORC1Q13415 861 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 SPOPLQ6IQ16 392 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 OTUB2Q96DC9 234 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 ZFRQ96KR1 1074 aaKnown RBP18.16■□□□□ 0.5
SMC4-216ENST00000485645 SMOQ99835 787 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 DUSP15Q9H1R2 295 aaPredicted RBP18.16■□□□□ 0.5
SMC4-216ENST00000485645 CCSER2Q9H7U1 834 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 GMIPQ9P107 970 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 MMP17Q9ULZ9 603 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 ZDHHC9Q9Y397 364 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 MYH10P35580 1976 aa18.16■□□□□ 0.5
SMC4-216ENST00000485645 FAM237AA0A1B0GTK4 181 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.15■□□□□ 0.5
SMC4-216ENST00000485645 DCLK1O15075 740 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 BEST1O76090 585 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 APODP05090 189 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 ZDHHC11BP0C7U3 371 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 NR2F2P24468 414 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 MPLP40238 635 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 ASPAP45381 313 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 MAP3K7CLP57077 242 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 DPYDQ12882 1025 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 NFIL3Q16649 462 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 USP39Q53GS9 565 aaKnown RBP18.15■□□□□ 0.5
SMC4-216ENST00000485645 PLA2G2CQ5R387 149 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 LY6G5CQ5SRR4 150 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 IL31Q6EBC2 164 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 INTS8Q75QN2 995 aaKnown RBP18.15■□□□□ 0.5
SMC4-216ENST00000485645 CCDC33Q8N5R6 958 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 C12orf29Q8N999 325 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 ZMIZ2Q8NF64 920 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 NACA2Q9H009 215 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 FBXO44Q9H4M3 255 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 FAM49BQ9NUQ9 324 aa18.15■□□□□ 0.5
SMC4-216ENST00000485645 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms