RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	PLA2G6	O60733	806 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	AHSG	P02765	367 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	CSTB	P04080	98 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	GJB1	P08034	283 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	CYP2C9	P11712	490 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	MYL4	P12829	197 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	FPR1	P21462	350 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	FGFR2	P21802	821 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	MGAT1	P26572	445 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	KLRC1	P26715	233 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	IL6ST	P40189	918 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	EXOSC9	Q06265	439 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	PMS2P11	Q13670	270 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	USP17L6P	Q6QN14	398 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	ZNF365	Q70YC5	407 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	SKAP1	Q86WV1	359 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	KRT73	Q86Y46	540 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	LIX1L	Q8IVB5	337 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	TRAPPC12	Q8WVT3	735 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	KAT6A	Q92794	2004 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	SCAMP4	Q969E2	229 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	SNX22	Q96L94	193 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	TIMP4	Q99727	224 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	AIFM2	Q9BRQ8	373 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	C1orf43	Q9BWL3	253 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	STK33	Q9BYT3	514 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	CPNE5	Q9HCH3	593 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	SLAMF7	Q9NQ25	335 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	CDC23	Q9UJX2	597 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	BTBD3	Q9Y2F9	522 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	PCDHGB2	Q9Y5G2	931 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	MAP3K4	Q9Y6R4	1608 aa		4.59	□□□□□ -1.67
VPS8-223	ENST00000485024	DCAF1	Q9Y4B6	1507 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	AOX1	Q06278	1338 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	CXorf49	A8MYA2	514 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	INSIG1	O15503	277 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	PIP5K1C	O60331	668 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	EIF5B	O60841	1220 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	MT-ND5	P03915	603 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	HDC	P19113	662 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	CD53	P19397	219 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	HSPA7	P48741	367 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	ALDH9A1	P49189	494 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	RENBP	P51606	427 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	POLE2	P56282	527 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	RPS16	P62249	146 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	PPFIA1	Q13136	1202 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	BMT2	Q1RMZ1	405 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	MPEG1	Q2M385	716 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	ZNF529	Q6P280	563 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	CCDC174	Q6PII3	467 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	FBXO38	Q6PIJ6	1188 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	COL23A1	Q86Y22	540 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	DCBLD1	Q8N8Z6	715 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	TEX19	Q8NA77	164 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	CYP2W1	Q8TAV3	490 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	P2RX7	Q99572	595 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	HEPH	Q9BQS7	1158 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	MAGEB5	Q9BZ81	275 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	REXO4	Q9GZR2	422 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	GPR35	Q9HC97	309 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	STK32B	Q9NY57	414 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	POGK	Q9P215	609 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	PGAP2	Q9UHJ9	254 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	TMX2	Q9Y320	296 aa		4.58	□□□□□ -1.68
VPS8-223	ENST00000485024	NINL	Q9Y2I6	1382 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	TBKBP1	A7MCY6	615 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	PYCARD-AS1	I3L0S3	204 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	HARS	P12081	509 aa	Known RBP	4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	WT1	P19544	449 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	GPD1	P21695	349 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	CCKAR	P32238	428 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	DDIT3	P35638	169 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	CARS	P49589	748 aa	Known RBP	4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	WNT3	P56703	355 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	FOXO1	Q12778	655 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	UBXN2B	Q14CS0	331 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC35G1	Q2M3R5	365 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	ZACN	Q401N2	412 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	MIDN	Q504T8	468 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	C3orf38	Q5JPI3	329 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	MFSD14B	Q5SR56	506 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	TMEM132C	Q8N3T6	1108 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	FITM2	Q8N6M3	262 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	MUL1	Q969V5	352 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	SPSB4	Q96A44	273 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	GCC1	Q96CN9	775 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	TBATA	Q96M53	351 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	NECTIN3	Q9NQS3	549 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	WWOX	Q9NZC7	414 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	ZNF212	Q9UDV6	495 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	ENTPD2	Q9Y5L3	495 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	SHROOM2	Q13796	1616 aa		4.57	□□□□□ -1.68
VPS8-223	ENST00000485024	MAGI3	Q5TCQ9	1506 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ARAP3	Q8WWN8	1544 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	RGS12	O14924	1447 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	ZMYM3	Q14202	1370 aa		4.56	□□□□□ -1.68
VPS8-223	ENST00000485024	JCAD	Q9P266	1359 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms