RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 NCAPGQ9BPX3 1015 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 LRRC4Q9HBW1 653 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTSA-207ENST00000484855 NLRC5Q86WI3 1866 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 ARHGEF37A1IGU5 675 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 AGPSO00116 658 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 ITGB1P05556 798 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 PTPN9P43378 593 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 CFAP58Q5T655 872 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 SCYL2Q6P3W7 929 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 SIX6OS1Q8N1H7 587 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 FBXO25Q8TCJ0 367 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 RTP3Q9BQQ7 232 aa17.49■□□□□ 0.39
CTSA-207ENST00000484855 PQBP1O60828 265 aaKnown RBP17.48■□□□□ 0.39
CTSA-207ENST00000484855 CCL5P13501 91 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 CDH6P55285 790 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 DYNLT1P63172 113 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 CALCOCO2Q13137 446 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
CTSA-207ENST00000484855 DRICH1Q6PGQ1 229 aaPredicted RBP17.48■□□□□ 0.39
CTSA-207ENST00000484855 TMC3Q7Z5M5 1100 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 SUSD3Q96L08 255 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 ACBD6Q9BR61 282 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 CALN1Q9BXU9 219 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 DNPEPQ9ULA0 475 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
CTSA-207ENST00000484855 F8W810 466 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 POLR3GO15318 223 aaPredicted RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 CST8O60676 142 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 DDHD2O94830 711 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 LMNB2Q03252 620 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 DSC1Q08554 894 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 ADCY1Q08828 1119 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 TRIP13Q15645 432 aaPredicted RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 INTS6LQ5JSJ4 861 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 BBS12Q6ZW61 710 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 GSTA5Q7RTV2 222 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 MYLPFQ96A32 169 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 FAM149B1Q96BN6 582 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 SMARCD1Q96GM5 515 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 SMOQ99835 787 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 FAM129AQ9BZQ8 928 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■□□□ 12.2
CTSA-207ENST00000484855 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 MTRF1LQ9UGC7 380 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 PATJQ8NI35 1801 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 B4GALT3O60512 393 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 HDAC4P56524 1084 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 DHX9Q08211 1270 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 MTMR3Q13615 1198 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 KRT81Q14533 505 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 GPNMBQ14956 572 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 BOLA3Q53S33 107 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 PLEKHG4Q58EX7 1191 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 OVOS1Q6IE37 1185 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 DBF4BQ8NFT6 615 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 TEKT4Q8WW24 435 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 RIN2Q8WYP3 895 aaPredicted RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 ART4Q93070 314 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 TBCBQ99426 244 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
CTSA-207ENST00000484855 TBC1D13Q9NVG8 400 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 WHRNQ9P202 907 aa17.47■□□□□ 0.39
CTSA-207ENST00000484855 DAB1O75553 588 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 COL6A1P12109 1028 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 ATF2P15336 505 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 TFE3P19532 575 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 HSD17B3P37058 310 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 TKTL1P51854 596 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 THEM5Q8N1Q8 247 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 TTC13Q8NBP0 860 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 NDRG1Q92597 394 aaKnown RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 SEPT8Q92599 483 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 SNF8Q96H20 258 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 C11orf84Q9BUA3 381 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 ZNF148Q9UQR1 794 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 NEU2Q9Y3R4 380 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 TYMPP19971 482 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 MATKP42679 507 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 OR1G1P47890 313 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 ARSEP51690 589 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 RABGGTBP53611 331 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 VCPP55072 806 aaKnown RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 DPYSL3Q14195 570 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 FAM171BQ6P995 826 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 MAP7D3Q8IWC1 876 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms