RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ZNHIT2Q9UHR6 403 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 CEPT1Q9Y6K0 416 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 AK5Q9Y6K8 562 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 EXOC1LA0A1B0GW35 172 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 FKBP6O75344 327 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 RALAP11233 206 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 KDSRQ06136 332 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 CD300CQ08708 224 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 RASA2Q15283 850 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 TRIP10Q15642 601 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 CCDC142Q17RM4 750 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 CCDC153Q494R4 210 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 METTL21CQ5VZV1 264 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 MRPS26Q9BYN8 205 aaKnown RBP12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 RAB20Q9NX57 234 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 EXOC7Q9UPT5 735 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 ZHX2Q9Y6X8 837 aa12.05□□□□□ -0.48
SEC61A1-205ENST00000483956 A0A1W2PPM1 405 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 GSTTP1A0A1W2PQM5 241 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 FUCA1P04066 466 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 FDX1P10109 184 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 EIF2B2P49770 351 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 GK3PQ14409 553 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 KRT81Q14533 505 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 INAQ16352 499 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 GRAMD1BQ3KR37 738 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 SYCP2LQ5T4T6 812 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 IYDQ6PHW0 289 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 NIPA1Q7RTP0 329 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 PODNQ7Z5L7 613 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ADGRG6Q86SQ4 1221 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 PRPF18Q99633 342 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 GBA3Q9H227 469 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 CAPN8A6NHC0 703 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ZC3H11AO75152 810 aaKnown RBP eCLIP12.04□□□□□ -0.482e-7■■□□□ 12.4
SEC61A1-205ENST00000483956 NFASCO94856 1347 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 STAMBPO95630 424 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 BCAP31P51572 246 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ARPC4P59998 168 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ZNF423Q2M1K9 1284 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ANO5Q75V66 913 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 TAS1R2Q8TE23 839 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 MFSD14AQ96MC6 490 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 OSBPL10Q9BXB5 764 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 ATAD3AQ9NVI7 634 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 RRN3Q9NYV6 651 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
SEC61A1-205ENST00000483956 GOLGA8IPA6NC78 632 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 GOLGA8JA6NMD2 632 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 DHX15O43143 795 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 TYROBPO43914 113 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ITGB5P18084 799 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ARL4CP56559 192 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 POTEHQ6S545 545 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 USP37Q86T82 979 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ICA1LQ8NDH6 482 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 EXD1Q8NHP7 514 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 SLC26A7Q8TE54 656 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 DHX38Q92620 1227 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 OXNAD1Q96HP4 312 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 GIT1Q9Y2X7 761 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 SLC16A4O15374 487 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 PLA2G6O60733 806 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 ENTPD3O75355 529 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 OCM2P0CE71 109 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 FDFT1P37268 417 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 QARSP47897 775 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MON1BQ7L1V2 547 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 PYROXD1Q8WU10 500 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 SSU72Q9NP77 194 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MTO1Q9Y2Z2 717 aaKnown RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 G3V3G9 751 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 CD48P09326 243 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MYL2P10916 166 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 S100A1P23297 94 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 MYBPC1Q00872 1141 aa12.03□□□□□ -0.48
SEC61A1-205ENST00000483956 CYTH1Q15438 398 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms