RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 RIPK1Q13546 671 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CYP51A1Q16850 503 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 TTC7BQ86TV6 843 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 LRRC71Q8N4P6 559 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CROTQ9UKG9 612 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DPYDQ12882 1025 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CCNIQ14094 377 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 ALFQ53S48 1182 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 UTP15Q8TED0 518 aaKnown RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 TMEM117Q9H0C3 514 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 SRRM3A6NNA2 597 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 PRPF4O43172 522 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL12A1-207ENST00000483888 GLRA3O75311 464 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 DRD4P21917 467 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 POU1F1P28069 291 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 TGFBR2P37173 567 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RAB15P59190 212 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 HERVK_113P62684 666 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 IL18R1Q13478 541 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FRMD7Q6ZUT3 714 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 RNF148Q8N7C7 305 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 FAR2Q96K12 515 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
COL12A1-207ENST00000483888 CHKAP35790 457 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 GDI2P50395 445 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 BTN3A2P78410 334 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 NFYCQ13952 458 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 AGKQ53H12 422 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 DMRTB1Q96MA1 342 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CCDC115Q96NT0 180 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZC3H12CQ9C0D7 883 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 NPATQ14207 1427 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 TYW5A2RUC4 315 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 H3BNX3 289 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PEX14O75381 377 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF682O95780 498 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SHROOM1Q2M3G4 852 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 FBXO31Q5XUX0 539 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CYP4V2Q6ZWL3 525 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CCDC28AQ8IWP9 274 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 GUF1Q8N442 669 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 AP4B1Q9Y6B7 739 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SQORQ9Y6N5 450 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 MYOM2P54296 1465 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 MROH7-TTC4A0A0A0MT08 1334 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 OSTNP61366 133 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ERO1BQ86YB8 467 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CAMK1DQ8IU85 385 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CCNFP41002 786 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ALDH6A1Q02252 535 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PRMT9Q6P2P2 845 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 MAGEE2Q8TD90 523 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 GOLGA4Q13439 2230 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PSAPP07602 524 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF37AP17032 561 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SLC45A4Q5BKX6 768 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 LDLRAP1Q5SW96 308 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 EPHX4Q8IUS5 362 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 GSDMCQ9BYG8 508 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PLEKHA5Q9HAU0 1116 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZSCAN5CA6NGD5 496 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 TEX28O15482 410 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 POLBP06746 335 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PKN3Q6P5Z2 889 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PARP8Q8N3A8 854 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 TOR1AIP2Q8NFQ8 470 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PNMA8BQ9ULN7 279 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 ZDHHC13Q8IUH4 622 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 KRT35Q92764 455 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SH3GLB2Q9NR46 395 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 NDFIP2Q9NV92 336 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 MRPL11Q9Y3B7 192 aaKnown RBP10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PRKACAP17612 351 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 IL13P35225 146 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 GMFBP60983 142 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 UGP2Q16851 508 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 CHSY1Q86X52 802 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 SPATA18Q8TC71 538 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 AGAP3Q96P47 875 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 RIC8BQ9NVN3 520 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 DUSP12Q9UNI6 340 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
COL12A1-207ENST00000483888 PHC2Q8IXK0 858 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SPATA16Q9BXB7 569 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms