RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 M0QYV0 167 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 GPR37L1O60883 481 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 OAS1P00973 400 aaKnown RBP16.45■□□□□ 0.22
RPP40-206ENST00000483546 CKMP06732 381 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 HDCP19113 662 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 USP8P40818 1118 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 SLC7A9P82251 487 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 APBA1Q02410 837 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 RAPGEF1Q13905 1077 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 DRAP1Q14919 205 aaPredicted RBP16.45■□□□□ 0.22
RPP40-206ENST00000483546 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 LRSAM1Q6UWE0 723 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 VITQ6UXI7 678 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 GPRIN1Q7Z2K8 1008 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 YAF2Q8IY57 180 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 SCML4Q8N228 414 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 ARHGAP18Q8N392 663 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 ZNF276Q8N554 614 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 BPIFB1Q8TDL5 484 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 SLC35F5Q8WV83 523 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 ZNF606Q8WXB4 792 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 IRF7Q92985 503 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 HSFY1Q96LI6 401 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 RPP25Q9BUL9 199 aaKnown RBP16.45■□□□□ 0.22
RPP40-206ENST00000483546 GANQ9H2C0 597 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 LRRC4Q9HBW1 653 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 TRPC7Q9HCX4 862 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 THG1LQ9NWX6 298 aaKnown RBP16.45■□□□□ 0.22
RPP40-206ENST00000483546 ARHGAP26Q9UNA1 814 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
RPP40-206ENST00000483546 FOXN3O00409 490 aaPredicted RBP16.44■□□□□ 0.22
RPP40-206ENST00000483546 CHADO15335 359 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 THAP12O43422 761 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 PRAMEF12O95522 483 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 VIPR2P41587 438 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 SYCP1Q15431 976 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 HECTD3Q5T447 861 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 BMP8AQ7Z5Y6 402 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 TADA2BQ86TJ2 420 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 LUZP1Q86V48 1076 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPP40-206ENST00000483546 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 STK32AQ8WU08 396 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 USP13Q92995 863 aaPredicted RBP16.44■□□□□ 0.22
RPP40-206ENST00000483546 PCMTD1Q96MG8 357 aaPredicted RBP16.44■□□□□ 0.22
RPP40-206ENST00000483546 CDK5RAP1Q96SZ6 601 aaKnown RBP16.44■□□□□ 0.22
RPP40-206ENST00000483546 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 PLA2G2FQ9BZM2 168 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 BRD9Q9H8M2 597 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
RPP40-206ENST00000483546 CYLDQ9NQC7 956 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 CNGB3Q9NQW8 809 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 CLIC5Q9NZA1 410 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 GMIPQ9P107 970 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
RPP40-206ENST00000483546 A0A1B0GTH6 734 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 C2orf78A6NCI8 922 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 F8VZ95 297 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 ZNF263O14978 683 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 CYP26A1O43174 497 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 NARSO43776 548 aaKnown RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 ABL1P00519 1130 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 TKTL1P51854 596 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 MLLT6P55198 1093 aaPredicted RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 GPC5P78333 572 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 PM20D1Q6GTS8 502 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 KLHDC10Q6PID8 442 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 FMNL3Q8IVF7 1028 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 SIX6OS1Q8N1H7 587 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 ARL14EPQ8N8R7 260 aaPredicted RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 SECISBP2LQ93073 1101 aaKnown RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 ASIC4Q96FT7 647 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 TSPY26PQ9H489 355 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 CHORDC1Q9UHD1 332 aaPredicted RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
RPP40-206ENST00000483546 FBXL21Q9UKT6 434 aa16.43■□□□□ 0.22
RPP40-206ENST00000483546 A0A1W2PQC6 194 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 TMEM221A6NGB7 291 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 PRR33A8MZF0 331 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 M0R296 226 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 FBXO21O94952 628 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 ZBED1O96006 694 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 SERPINC1P01008 464 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 RALAP11233 206 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 GDI1P31150 447 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 CLCN1P35523 988 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 GPD2P43304 727 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 ACADSBP45954 432 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 RPL34P49207 117 aaKnown RBP16.42■□□□□ 0.22
RPP40-206ENST00000483546 POLR2FP61218 127 aaKnown RBP16.42■□□□□ 0.22
RPP40-206ENST00000483546 USP4Q13107 963 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 TMEM31Q5JXX7 168 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 C1orf228Q6PIY5 440 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 IRGQQ8WZA9 623 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 RSPRY1Q96DX4 576 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 MSANTD3Q96H12 275 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 SHDQ96IW2 340 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms