RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RHBDF2Q6PJF5 856 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 STXBP4Q6ZWJ1 553 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 TMEFF1Q8IYR6 380 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 GRAMD1CQ8IYS0 662 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 NAT16Q8N8M0 369 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 IL17RCQ8NAC3 791 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 LINC00301Q8NCQ3 95 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 SCAMP5Q8TAC9 235 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 PLEKHO2Q8TD55 490 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 SCFD1Q8WVM8 642 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 PIGKQ92643 395 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 FBXO32Q969P5 355 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 C8orf48Q96LL4 319 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 FNBP1Q96RU3 617 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 KCNK16Q96T55 309 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 BCCIPQ9P287 314 aaKnown RBP eCLIP14.8□□□□□ -0.04
VARS-226ENST00000483275 DSPP15924 2871 aaKnown RBP14.8□□□□□ -0.04
VARS-226ENST00000483275 PKD1L2Q7Z442 2459 aa14.8□□□□□ -0.04
VARS-226ENST00000483275 A8MXQ7 604 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 C1QTNF9BB2RNN3 333 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 TRIM24O15164 1050 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SPTLC2O15270 562 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 COCHO43405 550 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 ADAM23O75077 832 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 KAT7O95251 611 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 MAPK8P45983 427 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 PGFP49763 221 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 IRX4P78413 519 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SHC2P98077 582 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SURF1Q15526 300 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 TDRD10Q5VZ19 366 aaKnown RBP14.79□□□□□ -0.04
VARS-226ENST00000483275 KIAA1211LQ6NV74 962 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SHC4Q6S5L8 630 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 FAM35AQ86V20 835 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 ADGRG2Q8IZP9 1017 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 DEFB119Q8N690 84 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 ZFRQ96KR1 1074 aaKnown RBP14.79□□□□□ -0.04
VARS-226ENST00000483275 SLITRK1Q96PX8 696 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 ELOVL4Q9GZR5 314 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 XYLT2Q9H1B5 865 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 SLC39A2Q9NP94 309 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 ARHGEF4Q9NR80 690 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 GMIPQ9P107 970 aa14.79□□□□□ -0.04
VARS-226ENST00000483275 MBD1Q9UIS9 605 aaPredicted RBP14.79□□□□□ -0.04
VARS-226ENST00000483275 TCRBV21S2A2A0A5A6 115 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 CDX4O14627 284 aaPredicted RBP14.78□□□□□ -0.04
VARS-226ENST00000483275 KHNYNO15037 678 aaKnown RBP14.78□□□□□ -0.04
VARS-226ENST00000483275 STX6O43752 255 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 TACC1O75410 805 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 APODP05090 189 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 YWHAQP27348 245 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 WASP42768 502 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 TRPC3Q13507 836 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 XXYLT1Q8NBI6 393 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 DEFB124Q8NES8 71 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 ZNF507Q8TCN5 953 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 PNKPQ96T60 521 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 TMEM9BQ9NQ34 198 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.047e-6■■■■■ 74.5
VARS-226ENST00000483275 TMEM74BQ9NUR3 256 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 HMGXB4Q9UGU5 601 aa14.78□□□□□ -0.04
VARS-226ENST00000483275 CHORDC1Q9UHD1 332 aaPredicted RBP14.78□□□□□ -0.04
VARS-226ENST00000483275 PHACTR2O75167 634 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 ADH1CP00326 375 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 CCDC130P13994 396 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 P2RY2P41231 377 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 KIR2DL1P43626 348 aaPredicted RBP14.77□□□□□ -0.05
VARS-226ENST00000483275 AFMP43652 599 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 SLC5A3P53794 718 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 MRPS21P82921 87 aaKnown RBP14.77□□□□□ -0.05
VARS-226ENST00000483275 BIRC3Q13489 604 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 ZNF699Q32M78 642 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 TRIM61Q5EBN2 209 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 PAQR9Q6ZVX9 377 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 BBS7Q8IWZ6 715 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 NUP93Q8N1F7 819 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 OLIG1Q8TAK6 271 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 JAKMIP2Q96AA8 810 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 KIAA1586Q9HCI6 787 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 KRT82Q9NSB4 513 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 MORC2Q9Y6X9 1032 aaPredicted RBP14.77□□□□□ -0.05
VARS-226ENST00000483275 DMXL2Q8TDJ6 3036 aa14.77□□□□□ -0.05
VARS-226ENST00000483275 UBE4BO95155 1302 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 LRRIQ3A6PVS8 624 aaPredicted RBP14.76□□□□□ -0.05
VARS-226ENST00000483275 SLC9A3R1O14745 358 aaPredicted RBP14.76□□□□□ -0.05
VARS-226ENST00000483275 POLR2DO15514 142 aaKnown RBP14.76□□□□□ -0.05
VARS-226ENST00000483275 MAP3K13O43283 966 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 PFKLP17858 780 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 EHHADHQ08426 723 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 CUL4BQ13620 913 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 ANO4Q32M45 955 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 DAB2IPQ5VWQ8 1189 aa14.76□□□□□ -0.05
VARS-226ENST00000483275 LPCAT2Q7L5N7 544 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms