RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 ZNF132P52740 706 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 BCAT1P54687 386 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 ZNF77Q15935 545 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 CNGA2Q16280 664 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 MIIPQ5JXC2 388 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 CDKAL1Q5VV42 579 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 GPRIN1Q7Z2K8 1008 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 RALGPS2Q86X27 583 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-229ENST00000483159 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
MRPL55-229ENST00000483159 ZNF276Q8N554 614 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 RBBP8NLQ8NC74 664 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-229ENST00000483159 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 KAT5Q92993 513 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 KREMEN1Q96MU8 473 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 NAT10Q9H0A0 1025 aaKnown RBP13.04□□□□□ -0.32
MRPL55-229ENST00000483159 GMIPQ9P107 970 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 APEX2Q9UBZ4 518 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 PIAS3Q9Y6X2 628 aa13.04□□□□□ -0.32
MRPL55-229ENST00000483159 FAM170BA6NMN3 283 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
MRPL55-229ENST00000483159 COCHO43405 550 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-229ENST00000483159 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-229ENST00000483159 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 MAGEA9P43362 315 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-229ENST00000483159 AMPD2Q01433 879 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 MYL5Q02045 173 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
MRPL55-229ENST00000483159 USP4Q13107 963 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 RUNX3Q13761 415 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 MTF1Q14872 753 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 RAB41Q5JT25 222 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 OSCP1Q8WVF1 389 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 TFAP2BQ92481 460 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 FAM3CQ92520 227 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 LTB4R2Q9NPC1 389 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 PTPRDP23468 1912 aa13.03□□□□□ -0.32
MRPL55-229ENST00000483159 SHISA7A6NL88 538 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 LEFTY2O00292 366 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 TPM2P07951 284 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 ZXDBP98169 803 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 TYRO3Q06418 890 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 PDE4CQ08493 712 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 UBXN2BQ14CS0 331 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 MEA1Q16626 185 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 KLHDC10Q6PID8 442 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 C11orf57Q6ZUT1 292 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 SCML4Q8N228 414 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 CDK5RAP1Q96SZ6 601 aaKnown RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 FOXQ1Q9C009 403 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 NACA2Q9H009 215 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 DLGAP2Q9P1A6 1054 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPL55-229ENST00000483159 CPQQ9Y646 472 aa13.02□□□□□ -0.33
MRPL55-229ENST00000483159 E2F8A0AVK6 867 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 SPECC1L-ADORA2AF8WAN1 911 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 CYP26A1O43174 497 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 MED7O43513 233 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 TLR5O60602 858 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 ZBED1O96006 694 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 RALAP11233 206 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 KRT5P13647 590 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 CD72P21854 359 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 IFNAR2P48551 515 aa13.01□□□□□ -0.33
MRPL55-229ENST00000483159 TKTL1P51854 596 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms