RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 CCNIQ14094 377 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 B3GNT9Q6UX72 402 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 PTCHD4Q6ZW05 846 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 KCTD20Q7Z5Y7 419 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 SAMD14Q8IZD0 417 aaPredicted RBP3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 SLC35G2Q8TBE7 412 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 PNISRQ8TF01 805 aaKnown RBP3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 MAP4K1Q92918 833 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 CUL5Q93034 780 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 CTHRC1Q96CG8 243 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 RTFDC1Q9BY42 306 aaPredicted RBP3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 ATP6V0A4Q9HBG4 840 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 NMRK2Q9NPI5 230 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF180Q9UJW8 692 aa3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 PNMA8BQ9ULN7 279 aaPredicted RBP3.83□□□□□ -1.8
LAPTM4A-202ENST00000483117 MYMKA6NI61 221 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 PHGDHO43175 533 aaKnown RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 SRGAP2O75044 1071 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 CYP19A1P11511 503 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 TKTP29401 623 aaKnown RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 PRKAR1BP31321 381 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 DIO1P49895 249 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF91Q05481 1191 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 MCL1Q07820 350 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 PIN1Q13526 163 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 RAB32Q13637 225 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 RAPGEF1Q13905 1077 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 TTF1Q15361 905 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 SEC23BQ15437 767 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 C10orf25Q5T742 122 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 CACHD1Q5VU97 1274 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 RUSC1-AS1Q66K80 236 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 TMEM65Q6PI78 240 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 CRELD2Q6UXH1 353 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 NPNTQ6UXI9 565 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZBTB34Q8NCN2 500 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 OR56A3Q8NH54 315 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 IL31RAQ8NI17 732 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 JPH3Q8WXH2 748 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZBTB45Q96K62 511 aaPredicted RBP3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 AIFM3Q96NN9 605 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 TAAR9Q96RI9 348 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 BRIP1Q9BX63 1249 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 USP22Q9UPT9 525 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 CDY1Q9Y6F8 540 aa3.82□□□□□ -1.8
LAPTM4A-202ENST00000483117 USP19O94966 1318 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 LY6G6EA0A0G2JKS1 128 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 TBX3O15119 743 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 AKAP10O43572 662 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 SPRY2O43597 315 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 RGS10O43665 173 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 RNF8O76064 485 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 RASAL1O95294 804 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 CREB1P16220 341 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 EN2P19622 333 aaPredicted RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 SLC7A1P30825 629 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 UQCRC1P31930 480 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 CCKBRP32239 447 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 RAB27AP51159 221 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 AGFG1P52594 562 aaKnown RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 ITGA8P53708 1063 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 LARS2Q15031 903 aaKnown RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 ANO6Q4KMQ2 910 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 SWSAP1Q6NVH7 229 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 OVCH2Q7RTZ1 564 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZDHHC17Q8IUH5 632 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 MAFAQ8NHW3 353 aaPredicted RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 VCPIP1Q96JH7 1222 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 SIGLEC11Q96RL6 698 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 VN1R3Q9BXE9 311 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 B3GNT5Q9BYG0 378 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 BRINP2Q9C0B6 783 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF518BQ9C0D4 1074 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 TMEM184CQ9NVA4 438 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 DNMT3BQ9UBC3 853 aaKnown RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 ZNF580Q9UK33 172 aa3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 NOP58Q9Y2X3 529 aaKnown RBP3.81□□□□□ -1.8
LAPTM4A-202ENST00000483117 H3BNC9 293 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 H7C4K7 107 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 CD3EAPO15446 510 aaKnown RBP3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TUSC2O75896 110 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TMEM191BP0C7N4 346 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 HGFP14210 728 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 PHKG2P15735 406 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 ATF7P17544 494 aaPredicted RBP3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 IBSPP21815 317 aaPredicted RBP3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 EPHA3P29320 983 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 MTHFSP49914 203 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TIRAPP58753 221 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 KLHL22Q53GT1 634 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 TMTC4Q5T4D3 741 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 DCDC5Q6ZRR9 648 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 EPM2AIP1Q7L775 607 aaPredicted RBP3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 MICU3Q86XE3 530 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 RAB11FIP4Q86YS3 637 aa3.8□□□□□ -1.8
LAPTM4A-202ENST00000483117 LINC01465Q8N7H1 131 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms