RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 GPRIN1Q7Z2K8 1008 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 UBA3Q8TBC4 463 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 SH3RF2Q8TEC5 729 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 RNF38Q9H0F5 515 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 MRPS17Q9Y2R5 130 aaKnown RBP19.39■□□□□ 0.69
SMIM4-204ENST00000482728 SIT1Q9Y3P8 196 aa19.39■□□□□ 0.69
SMIM4-204ENST00000482728 O00370 1275 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 LETM1O95202 739 aaPredicted RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 OAS1P00973 400 aaKnown RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 MBL2P11226 248 aaPredicted RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 GLULP15104 373 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 CD72P21854 359 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 USP8P40818 1118 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 SLC7A9P82251 487 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 PDE4CQ08493 712 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 BST2Q10589 180 aaKnown RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 UBXN2BQ14CS0 331 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 ARHGAP44Q17R89 818 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 MIIPQ5JXC2 388 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 CWF19L1Q69YN2 538 aaKnown RBP19.38■□□□□ 0.69
SMIM4-204ENST00000482728 GJB7Q6PEY0 223 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 LCLAT1Q6UWP7 414 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 TTC30AQ86WT1 665 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 TMEM105Q8N8V8 129 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 TFAP2BQ92481 460 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 SMPD4Q9NXE4 827 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 TAB2Q9NYJ8 693 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 PIAS3Q9Y6X2 628 aa19.38■□□□□ 0.69
SMIM4-204ENST00000482728 FAM170BA6NMN3 283 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 ARNTLO00327 626 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 XPO1O14980 1071 aaKnown RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 CYP26A1O43174 497 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 PI15O43692 258 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 ZDHHC11BP0C7U3 371 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 BRD2P25440 801 aaKnown RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 TUBP50607 506 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 ZNF132P52740 706 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 MLLT6P55198 1093 aaPredicted RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 MTF1Q14872 753 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 PDGFRLQ15198 375 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 ITPRIPL2Q3MIP1 535 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 CDKAL1Q5VV42 579 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 TTC8Q8TAM2 541 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 PRRX2Q99811 253 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 FAM83CQ9BQN1 747 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 DDX23Q9BUQ8 820 aaKnown RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 FOXQ1Q9C009 403 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 VPS16Q9H269 839 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 C8orf33Q9H7E9 229 aaPredicted RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 CCSER2Q9H7U1 834 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 LRRC4Q9HBW1 653 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 DUS2Q9NX74 493 aaKnown RBP19.37■□□□□ 0.69
SMIM4-204ENST00000482728 GTSE1Q9NYZ3 720 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 CNTN6Q9UQ52 1028 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 CPQQ9Y646 472 aa19.37■□□□□ 0.69
SMIM4-204ENST00000482728 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 LEFTY2O00292 366 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 NCAM2O15394 837 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 COCHO43405 550 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 TLR5O60602 858 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 SETSIPP0DME0 302 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 IFNAR2P48551 515 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 PSEN1P49768 467 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 NUBP1P53384 320 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 APBA1Q02410 837 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 TNK2Q07912 1038 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 KRT31Q15323 416 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 ZNF77Q15935 545 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 ANO6Q4KMQ2 910 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 C1orf228Q6PIY5 440 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 CCDC186Q7Z3E2 898 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 DDX42Q86XP3 938 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMIM4-204ENST00000482728 KCNH6Q9H252 994 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 EBF3Q9H4W6 596 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 RAPGEFL1Q9UHV5 662 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 NAGPAQ9UK23 515 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 DNAJC12Q9UKB3 198 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 USP3Q9Y6I4 520 aa19.36■□□□□ 0.69
SMIM4-204ENST00000482728 A0A1W2PQH9 124 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 MED7O43513 233 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 OLFM2O95897 454 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 CALCAP01258 141 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 RALAP11233 206 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 TCF3P15923 654 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 ATP5C1P36542 298 aaKnown RBP19.35■□□□□ 0.69
SMIM4-204ENST00000482728 TKTL1P51854 596 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 RUNX3Q13761 415 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 FKBP15Q5T1M5 1219 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 RALGPS2Q86X27 583 aaPredicted RBP19.35■□□□□ 0.69
SMIM4-204ENST00000482728 ARHGAP18Q8N392 663 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 PJA1Q8NG27 643 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 OSCP1Q8WVF1 389 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 FAM3CQ92520 227 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 MSANTD3Q96H12 275 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 OSBPL6Q9BZF3 934 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 LTB4R2Q9NPC1 389 aa19.35■□□□□ 0.69
SMIM4-204ENST00000482728 CFAP97Q9P2B7 532 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms