RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 CC2D1AQ6P1N0 951 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 GJB7Q6PEY0 223 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 C1orf228Q6PIY5 440 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 CLEC20AQ6ZU45 233 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 GAREM2Q75VX8 874 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 BEND5Q7L4P6 421 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 APTXQ7Z2E3 356 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 CCDC186Q7Z3E2 898 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TMEM110Q86TL2 294 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 RNF135Q8IUD6 432 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 GPIHBP1Q8IV16 184 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ARID3BQ8IVW6 561 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 CMTM8Q8IZV2 173 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ZNF687Q8N1G0 1237 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SCML4Q8N228 414 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SLC44A3Q8N4M1 653 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SHKBP1Q8TBC3 707 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ZSCAN18Q8TBC5 510 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 GPR152Q8TDT2 470 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 IPO4Q8TEX9 1081 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 RNF139Q8WU17 664 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 DEPDC1BQ8WUY9 529 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TFAP2BQ92481 460 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SYN2Q92777 582 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 IRF7Q92985 503 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 KAT5Q92993 513 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SECISBP2LQ93073 1101 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ELMO3Q96BJ8 720 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 MSANTD3Q96H12 275 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SHDQ96IW2 340 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ASB16Q96NS5 453 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 NAP1L5Q96NT1 182 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 MYADMQ96S97 322 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SMOQ99835 787 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TRMT61BQ9BVS5 477 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 KCNK12Q9HB15 430 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 IL21Q9HBE4 155 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 NLRC4Q9NPP4 1024 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TRPV5Q9NQA5 729 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ABCC13Q9NSE7 274 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 OLA1Q9NTK5 396 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TDP1Q9NUW8 608 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ZNHIT6Q9NWK9 470 aaKnown RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 HMGXB4Q9UGU5 601 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 CHORDC1Q9UHD1 332 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 STRIP2Q9ULQ0 834 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 USP3Q9Y6I4 520 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
SHANK2-216ENST00000482659 SCN5AQ14524 2016 aa4.79□□□□□ -1.64
SHANK2-216ENST00000482659 ITIH6Q6UXX5 1313 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 DNAH12Q6ZR08 3092 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 HHLA1C9JL84 531 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CAPN9O14815 690 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 ZNF263O14978 683 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CHADO15335 359 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 DCXO43602 365 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 TLR5O60602 858 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 MOSPD3O75425 235 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 BEST1O76090 585 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CKMP06732 381 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 GLI1P08151 1106 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 ZDHHC11BP0C7U3 371 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 GLULP15104 373 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 TCF3P15923 654 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 GJA1P17302 382 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 DESP17661 470 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CEBPBP17676 345 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CLCN1P35523 988 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CCR2P41597 374 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 GPD2P43304 727 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 RPL34P49207 117 aaKnown RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 GPR15P49685 360 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CACNA2D1P54289 1103 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 YWHAZP63104 245 aaKnown RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SLC7A9P82251 487 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 ZBED6P86452 979 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 CDR2Q01850 454 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 IFRD2Q12894 506 aaPredicted RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 NR1H3Q13133 447 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 PDGFRLQ15198 375 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 PREPLQ4J6C6 727 aaPredicted RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 ARHGAP29Q52LW3 1261 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 EFHC1Q5JVL4 640 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SFMBT2Q5VUG0 894 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SDHAF4Q5VUM1 108 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 BTBD8Q5XKL5 378 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SPECC1LQ69YQ0 1117 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 TXNDC8Q6A555 127 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 DPY19L2P1Q6NXN4 242 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SARM1Q6SZW1 724 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 TOGARAM2Q6ZUX3 1019 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 RSRC2Q7L4I2 434 aaKnown RBP4.78□□□□□ -1.64
SHANK2-216ENST00000482659 SLC47A2Q86VL8 602 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 VPS36Q86VN1 386 aa4.78□□□□□ -1.64
SHANK2-216ENST00000482659 TTC30AQ86WT1 665 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms