RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 BRCC3P46736 316 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 ARSEP51690 589 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 YWHAZP63104 245 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 CAV1Q03135 178 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 RNASELQ05823 741 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 MTMR3Q13615 1198 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TFDP2Q14188 446 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 C4orf50Q6ZRC1 276 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PSTKQ8IV42 348 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 ABI1Q8IZP0 508 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 SIX6OS1Q8N1H7 587 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 C1orf54Q8WWF1 131 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 IRGQQ8WZA9 623 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 NKD2Q969F2 451 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 NT5C3BQ969T7 300 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PCED1BQ96HM7 432 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PIWIL1Q96J94 861 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 CASD1Q96PB1 797 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 SMOQ99835 787 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TMEM175Q9BSA9 504 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TRIM51Q9BSJ1 452 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TRIM62Q9BVG3 475 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 COLEC11Q9BWP8 271 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 HEMGNQ9BXL5 484 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 OXCT2Q9BYC2 517 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TSPYL1Q9H0U9 437 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 MED4Q9NPJ6 270 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 WHRNQ9P202 907 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 TIMM13Q9Y5L4 95 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 ESYT3A0FGR9 886 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 PIK3R2O00459 728 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CLDN5O00501 218 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 LIASO43766 372 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ECHS1P30084 290 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 RFC2P35250 354 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 MNX1P50219 401 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 AIF1P55008 147 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 YWHAHQ04917 246 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ADCY1Q08828 1119 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ADIGQ0VDE8 80 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ELAVL2Q12926 359 aaKnown RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 PPP1R7Q15435 360 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 SLC25A52Q3SY17 297 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ERMARDQ5T6L9 678 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 FBXO46Q6PJ61 603 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CYP4V2Q6ZWL3 525 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 BEND5Q7L4P6 421 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CTU1Q7Z7A3 348 aaKnown RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 ZNF280BQ86YH2 543 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 NPAS4Q8IUM7 802 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 GSPT2Q8IYD1 628 aaKnown RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 DCP1BQ8IZD4 617 aaKnown RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CRIPAKQ8N1N5 446 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CCDC89Q8N998 374 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 FAM172AQ8WUF8 416 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 CFAP57Q96MR6 1250 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 SLC2A13Q96QE2 648 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 HERPUD2Q9BSE4 406 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
GGPS1-205ENST00000482013 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 STAP1Q9ULZ2 295 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 NLRC5Q86WI3 1866 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 PATJQ8NI35 1801 aa12.23□□□□□ -0.45
GGPS1-205ENST00000482013 HHLA1C9JL84 531 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 PQBP1O60828 265 aaKnown RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 GRAP2O75791 330 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 BEST1O76090 585 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ALDH2P05091 517 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ITGAVP06756 1048 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 KRT10P13645 584 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 KCNJ1P48048 391 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 TKTL1P51854 596 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 DAOAP59103 153 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 KRT17Q04695 432 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 CALCOCO2Q13137 446 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 BYSLQ13895 437 aaKnown RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 PM20D1Q6GTS8 502 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ANKS1BQ7Z6G8 1248 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ZMIZ2Q8NF64 920 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ART4Q93070 314 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 MYLPFQ96A32 169 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ARMC5Q96C12 935 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 PGAP3Q96FM1 320 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 FUBP3Q96I24 572 aaKnown RBP eCLIP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ZNF333Q96JL9 665 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 PEBP4Q96S96 227 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 SLC9A7Q96T83 725 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 FOXP3Q9BZS1 431 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 DPH5Q9H2P9 285 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms