RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 TCF3P15923 654 aa21.28■■□□□ 1
VPS36-204ENST00000480923 RPS9P46781 194 aaKnown RBP21.28■■□□□ 1
VPS36-204ENST00000480923 ARHGAP17Q68EM7 881 aa21.28■■□□□ 1
VPS36-204ENST00000480923 EHBP1Q8NDI1 1231 aa21.28■■□□□ 1
VPS36-204ENST00000480923 LMAN1LQ9HAT1 526 aa21.28■■□□□ 1
VPS36-204ENST00000480923 PNPLA8Q9NP80 782 aa21.28■■□□□ 1
VPS36-204ENST00000480923 DACH1Q9UI36 760 aa21.28■■□□□ 1
VPS36-204ENST00000480923 GREB1Q4ZG55 1949 aa21.27■■□□□ 1
VPS36-204ENST00000480923 COCHO43405 550 aa21.27■■□□□ 1
VPS36-204ENST00000480923 ZDHHC11BP0C7U3 371 aa21.27■■□□□ 1
VPS36-204ENST00000480923 SLC8A3P57103 927 aa21.27■■□□□ 1
VPS36-204ENST00000480923 ZXDBP98169 803 aa21.27■■□□□ 1
VPS36-204ENST00000480923 PON2Q15165 354 aa21.27■■□□□ 1
VPS36-204ENST00000480923 SGO2Q562F6 1265 aa21.27■■□□□ 1
VPS36-204ENST00000480923 SNX30Q5VWJ9 437 aa21.27■■□□□ 1
VPS36-204ENST00000480923 TXNDC11Q6PKC3 985 aa21.27■■□□□ 1
VPS36-204ENST00000480923 ZNF687Q8N1G0 1237 aa21.27■■□□□ 1
VPS36-204ENST00000480923 CPA6Q8N4T0 437 aa21.27■■□□□ 1
VPS36-204ENST00000480923 UBR7Q8N806 425 aa21.27■■□□□ 1
VPS36-204ENST00000480923 LMO3Q8TAP4 145 aa21.27■■□□□ 1
VPS36-204ENST00000480923 PHOX2BQ99453 314 aa21.27■■□□□ 1
VPS36-204ENST00000480923 NACA2Q9H009 215 aa21.27■■□□□ 1
VPS36-204ENST00000480923 INTS2Q9H0H0 1204 aaKnown RBP21.27■■□□□ 1
VPS36-204ENST00000480923 CCSER2Q9H7U1 834 aa21.27■■□□□ 1
VPS36-204ENST00000480923 TLR8Q9NR97 1041 aaKnown RBP21.27■■□□□ 1
VPS36-204ENST00000480923 PCDHB4Q9Y5E5 795 aa21.27■■□□□ 1
VPS36-204ENST00000480923 DENND4CQ5VZ89 1909 aa21.27■■□□□ 1
VPS36-204ENST00000480923 CYP26A1O43174 497 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 LAMTOR5O43504 91 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 PTMSP20962 102 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 TUBP50607 506 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 FZD5Q13467 585 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 GOLGA7BQ2TAP0 167 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 TMEM270Q6UE05 265 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 RRAGAQ7L523 313 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 DDX42Q86XP3 938 aaKnown RBP eCLIP21.26■□□□□ 0.99
VPS36-204ENST00000480923 GPT2Q8TD30 523 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 KAT5Q92993 513 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 ATP2A3Q93084 1043 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 CFAP97Q9P2B7 532 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 HESX1Q9UBX0 185 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 SCML2Q9UQR0 700 aa21.26■□□□□ 0.99
VPS36-204ENST00000480923 OTOL1A6NHN0 477 aaPredicted RBP21.25■□□□□ 0.99
VPS36-204ENST00000480923 VDRP11473 427 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 MTIF2P46199 727 aaKnown RBP21.25■□□□□ 0.99
VPS36-204ENST00000480923 KIF11P52732 1056 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 LRRC32Q14392 662 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 EML3Q32P44 896 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 ARHGEF19Q8IW93 802 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 ANKRD52Q8NB46 1076 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 LINC00597Q9H2U6 94 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 ECT2Q9H8V3 914 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 TSPAN16Q9UKR8 245 aa21.25■□□□□ 0.99
VPS36-204ENST00000480923 TLR5O60602 858 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 CHRNB1P11230 501 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 ERCC5P28715 1186 aaPredicted RBP21.24■□□□□ 0.99
VPS36-204ENST00000480923 PGFP49763 221 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 AMPD2Q01433 879 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 GCNT1Q02742 428 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 IRF2BP1Q8IU81 584 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 FAM114A1Q8IWE2 563 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 CHRDQ9H2X0 955 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 THAP9Q9H5L6 903 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 RBM12Q9NTZ6 932 aaKnown RBP21.24■□□□□ 0.99
VPS36-204ENST00000480923 KIAA1257Q9ULG3 409 aa21.24■□□□□ 0.99
VPS36-204ENST00000480923 A0A1W2PQH9 124 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
VPS36-204ENST00000480923 NFATC1O95644 943 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 PAEPP09466 180 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 BCAT1P54687 386 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 MTAPQ13126 283 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 NR1H3Q13133 447 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 ALYREFQ86V81 257 aaKnown RBP21.23■□□□□ 0.99
VPS36-204ENST00000480923 PIGZQ86VD9 579 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 TTC30AQ86WT1 665 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 RBBP8NLQ8NC74 664 aaPredicted RBP21.23■□□□□ 0.99
VPS36-204ENST00000480923 CRACR2AQ9BSW2 395 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 UBXN6Q9BZV1 441 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 NAGPAQ9UK23 515 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 ANAPC1Q9H1A4 1944 aa21.23■□□□□ 0.99
VPS36-204ENST00000480923 MIA3Q5JRA6 1907 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 SLC9A3R1O14745 358 aaPredicted RBP21.22■□□□□ 0.99
VPS36-204ENST00000480923 SP9P0CG40 484 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 GJA4P35212 333 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 MRE11P49959 708 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 PDE4CQ08493 712 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 BST2Q10589 180 aaKnown RBP21.22■□□□□ 0.99
VPS36-204ENST00000480923 DGKKQ5KSL6 1271 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 CCDC186Q7Z3E2 898 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 ZFRQ96KR1 1074 aaKnown RBP21.22■□□□□ 0.99
VPS36-204ENST00000480923 NMUR1Q9HB89 426 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 OSER1Q9NX31 292 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 SH3BP1Q9Y3L3 701 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 USP3Q9Y6I4 520 aa21.22■□□□□ 0.99
VPS36-204ENST00000480923 ZNF638Q14966 1978 aaKnown RBP21.22■□□□□ 0.99
VPS36-204ENST00000480923 KIF26AQ9ULI4 1882 aaPredicted RBP21.22■□□□□ 0.99
VPS36-204ENST00000480923 RNF225M0QZC1 329 aaPredicted RBP21.21■□□□□ 0.99
VPS36-204ENST00000480923 O00370 1275 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 TBX18O95935 607 aa21.21■□□□□ 0.99
VPS36-204ENST00000480923 IRF1P10914 325 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms