RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 C11orf96Q7Z7L8 435 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 METTL16Q86W50 562 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 HNRNPLLQ8WVV9 542 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 POLG2Q9UHN1 485 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CRB1P82279 1406 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 BIRC5O15392 142 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TRMT5Q32P41 509 aaKnown RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 IL17RAQ96F46 866 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 IL1RL2Q9HB29 575 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MGAT4DA6NG13 374 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ACOT2P49753 483 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 TAF2Q6P1X5 1199 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ZMYM2Q9UBW7 1377 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CLTBP09497 229 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 MDH1BQ5I0G3 518 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 OSBPL6Q9BZF3 934 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 EFCAB1Q9HAE3 211 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 RGS18Q9NS28 235 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 ROBO2Q9HCK4 1378 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 KDM6BO15054 1643 aa9.86□□□□□ -0.83
VEGFA-212ENST00000480614 CNOT3O75175 753 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RAD23AP54725 363 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 YWHAZP63104 245 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 HLFQ16534 295 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 GALNT4Q8N4A0 578 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 TMEM237Q96Q45 408 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF518BQ9C0D4 1074 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 E9PBE3 544 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CST8O60676 142 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CETPP11597 493 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 SCUBE1Q8IWY4 988 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 GNG14A0A1W2PPG7 69 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 PTPN7P35236 360 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CTCFP49711 727 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 BLOC1S5Q8TDH9 187 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 GPR101Q96P66 508 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 FBXO2Q9UK22 296 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 GTF3C4Q9UKN8 822 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ANKRD6Q9Y2G4 727 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RPS7P62081 194 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CCDC81Q6ZN84 652 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CLEC4MQ9H2X3 399 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 FAM49BQ9NUQ9 324 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 COMMD8Q9NX08 183 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CEP290O15078 2479 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 MAGEA13PA6NCF6 341 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 MFSD4BQ5TF39 518 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 HHIPL2Q6UWX4 724 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RRN3Q9NYV6 651 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 UBQLN1Q9UMX0 589 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 MAGEB16A2A368 324 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 TRIM49D1C9J1S8 452 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 BCAT1P54687 386 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 SHC4Q6S5L8 630 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF786Q8N393 782 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 TRIM51Q9BSJ1 452 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 NYAP2Q9P242 653 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 STK39Q9UEW8 545 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RGS5O15539 181 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RBP3P10745 1247 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 YWHAQP27348 245 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 TAF6P49848 677 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RPS6P62753 249 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 SMAD1Q15797 465 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 SLC25A41Q8N5S1 370 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
VEGFA-212ENST00000480614 DPP3Q9NY33 737 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 KLHL3Q9UH77 587 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 FAM220BPB1ANY3 271 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 KRT74Q7RTS7 529 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 KDELC2Q7Z4H8 507 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 CYP39A1Q9NYL5 469 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 GPR182O15218 404 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF484Q5JVG2 852 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 C4orf33Q8N1A6 199 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 NCKIPSDQ9NZQ3 722 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 KLHL20Q9Y2M5 609 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 RPS6KL1Q9Y6S9 549 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 ARID1AO14497 2285 aa9.85□□□□□ -0.83
VEGFA-212ENST00000480614 XPO1O14980 1071 aaKnown RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 GSTM1P09488 218 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 ZNF23P17027 643 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 USP33Q8TEY7 942 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 TRIM63Q969Q1 353 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 PHACTR1Q9C0D0 580 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 PSMD12O00232 456 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 CALB2P22676 271 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 RPS12P25398 132 aaKnown RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 ELAVL2Q12926 359 aaKnown RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 DDR2Q16832 855 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 POP5Q969H6 163 aaKnown RBP9.84□□□□□ -0.83
VEGFA-212ENST00000480614 WDCPQ9H6R7 721 aa9.84□□□□□ -0.83
VEGFA-212ENST00000480614 STON1Q9Y6Q2 735 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms