RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 UVSSAQ2YD98 709 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 FAM78AQ5JUQ0 283 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 STXBP5Q5T5C0 1151 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 PPP4R4Q6NUP7 873 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 POMZP3Q6PJE2 187 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 VITQ6UXI7 678 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 CHSY3Q70JA7 882 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 RALYLQ86SE5 291 aaKnown RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 SPATS2Q86XZ4 545 aaKnown RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 C12orf50Q8NA57 414 aaPredicted RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 KCT2Q8NC54 265 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 CMASQ8NFW8 434 aaPredicted RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 OR2I1PQ8NGU4 316 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 DNAJB8Q8NHS0 232 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 URGCPQ8TCY9 931 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 KCTD13Q8WZ19 329 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 ACDQ96AP0 544 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 CDHR1Q96JP9 859 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 DSCC1Q9BVC3 393 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 SPZ1Q9BXG8 430 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 MRPL9Q9BYD2 267 aaKnown RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 GCOM2Q9BZD3 368 aaPredicted RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 MAF1Q9H063 256 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 IFT22Q9H7X7 185 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 BRD9Q9H8M2 597 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 IFT122Q9HBG6 1241 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 GOLGA2P5Q9HBQ8 144 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 WRAP73Q9P2S5 460 aaPredicted RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 ZNF180Q9UJW8 692 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 GPR55Q9Y2T6 319 aaPredicted RBP4.37□□□□□ -1.71
COPS7B-220ENST00000479430 IPPQ9Y573 584 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 DOCK9Q9BZ29 2069 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 CNTNAP5Q8WYK1 1306 aa4.37□□□□□ -1.71
COPS7B-220ENST00000479430 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 CKAP5Q14008 2032 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 NAV2Q8IVL1 2488 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 CCDC69A6NI79 296 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ARNTLO00327 626 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SH2B2O14492 632 aaPredicted RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MSH4O15457 936 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 TADA2AO75478 443 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PRKD3O94806 890 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SEC24AO95486 1093 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 RHOP08100 348 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 CHRNB1P11230 501 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PCP11498 1178 aaKnown RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ADH5P11766 374 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MYL4P12829 197 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ITGA4P13612 1032 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 NID1P14543 1247 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 GSPT1P15170 499 aaKnown RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SDHBP21912 280 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 HOXC12P31275 282 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 FLT3P36888 993 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ASPAP45381 313 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 CXCL12P48061 93 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SCNN1BP51168 640 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PRKCQQ04759 706 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 TNK2Q07912 1038 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MAP4K2Q12851 820 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 TRDNQ13061 729 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 GIT2Q14161 759 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MLC1Q15049 377 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PSMD5Q16401 504 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PABPC1LQ4VXU2 614 aaKnown RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 GLRA4Q5JXX5 417 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SLC35F1Q5T1Q4 408 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 RNF43Q68DV7 783 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ZCCHC8Q6NZY4 707 aaKnown RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ZNF852Q6ZMS4 543 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 TMTC3Q6ZXV5 915 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 USP53Q70EK8 1073 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ARMCX6Q7L4S7 300 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MAEAQ7L5Y9 396 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ZBTB46Q86UZ6 589 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 MAP4K3Q8IVH8 894 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 RNF168Q8IYW5 571 aaPredicted RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 DEFB119Q8N690 84 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 SAMD3Q8N6K7 520 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 FRMD1Q8N878 549 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PNPLA1Q8N8W4 532 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 STKLD1Q8NE28 680 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 NCOA7Q8NI08 942 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 LNX1Q8TBB1 728 aaPredicted RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 JPH3Q8WXH2 748 aaPredicted RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 FAM3CQ92520 227 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 GATA6Q92908 595 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 LENG9Q96B70 501 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 C1orf159Q96HA4 380 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 LRRC3BQ96PB8 259 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 LSM14BQ9BX40 385 aaKnown RBP4.36□□□□□ -1.71
COPS7B-220ENST00000479430 PRDM14Q9GZV8 571 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 RXFP1Q9HBX9 757 aa4.36□□□□□ -1.71
COPS7B-220ENST00000479430 ZNF334Q9HCZ1 680 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms